Result for D87ED7AE4A34008599E7F1E2AB90DB330FAD71FD

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Children (15)

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Key Value
FileSize1924552
MD5DDBD9BD63D2973883CDC5A8EC720E092
PackageDescriptionTop-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples.
PackageMaintainerThe Debichem Group <debichem-devel@lists.alioth.debian.org>
PackageNametoppic
PackageSectionscience
PackageVersion1.3.0+dfsg1-4+b1
SHA-1D87ED7AE4A34008599E7F1E2AB90DB330FAD71FD
SHA-256ED7944878C55384A39A37C282A2008C66976F99EC3B75DE8E3A7D138FA3957B9
hashlookup:children-total15
hashlookup:trust50

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Children (Total: 15)

The searched file hash includes 15 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/doc/toppic/changelog.Debian.mips64el.gz
FileSize225
MD503B85F3130B06DB1F84A9E229CBA61FD
SHA-18D38687854CA9DC7A7D46C50EC628AD015A8EC2C
SHA-25698A9D2384EC838CDF802EAD4B2D25ABBE23F93B5E072FE8F047937736C530D7B
SSDEEP6:Xt77OE5L3spVT0So2QDHHyVClfEMjbGpTMsn:XByCcmxDnyolMMjbkT/n
TLSHT136D0A7388875B79ED6B4A820C44AD0D2175AE488658DC65301AC494934D8D5358945BD
Key Value
FileName./usr/bin/topfd
FileSize1932672
MD5697C9A802506B62B5A0A3B55D1A3F5E3
SHA-1952B79408474461CC40FD6C79FCE2F49DCC594A3
SHA-2564FE9926EBE33957B40D44498369C5209832926BC1B284C8FFB4BFB70C2DD58EA
SSDEEP12288:m+pnEptGxhKALZZGhPKmuXfKkcdEGLQl/ptp9aZFLu+g0Efb6NLL2Up5vhKK:m+pE0uPKhwx8l/vIFFD5vh1
TLSHT1C4952A95BB895F2BC8DC8FB6DC37E275005C2C83A4490D2A7DC42A8D9F6B6CE0F52945
Key Value
FileName./usr/share/man/man1/topfd.1.gz
FileSize1782
MD50F1ACE6CE2995E873451A8C2898E075C
SHA-1F04FD48BC3BAA084611E86DC26AE4B48BE44F274
SHA-256B329D87F5B90C41E97EC98D417CDFF48C0F7CB3237F4F968B4396B3D3220326C
SSDEEP48:X8EYTifWKUlTXI0B82L44MYsGM0I0Ta9Aul:sEYTi3Ulc0K2hsGMgTaey
TLSHT1CE314B0CDE196BA4CCF50D6B332051100693BF723285C136BE366B80498561242C8D67
Key Value
FileName./usr/bin/topmg
FileSize4168632
MD5A0C3C9909F24472433D7A6B3903F6D1B
SHA-1B5F2F147EBC8A517679C06EEF3B9F91001EF151E
SHA-256518B220AB9CF8B2E73D8AB908C482C3D04D07C99453775D39F68C2860CAC9BB6
SSDEEP24576:VjZY8VHS4vkcyV/b8AIOa5OVsbnw6nH+xr7O75OiF7BTz6+ElDdYsLjobJUDL:V9Y8V31yJ+5EwZe17O75OiFF/sLMN
TLSHT1A0162A557B885F6BC8EC8FB9EC3AC37B005D2D87B0094E267C94198DA7276CE0B86D45
Key Value
FileName./usr/share/man/man1/topmg.1.gz
FileSize3535
MD547CEEA9F6884D8FCACB81BEE2B3A5B99
SHA-13E15EE2D09377935673E9F74002F8FCD0EDCC582
SHA-2565C3CCDF8A89CF090B8E3309981E2B687E2CCB5EBF4346DD2724CC2E8C0266FEE
SSDEEP96:cPBsgiFqqjLokIooEdVWGAPUJNi2q7OmgSeycmt:EUFZj/IAW93/tghmt
TLSHT121716EC29EC1A8E2D7AEE94136E2ADF7C5504743D14C7DE567B082912323BCA459F05C
Key Value
FileName./usr/share/doc/toppic/README.Debian
FileSize395
MD59F1BE0E5BC01366624E688E7A6289E9D
SHA-12A85C921E54A42617DD7AE8CEFBEFECEA0ECE908
SHA-25615B781A7178B651A4AE147E3BC4C42F56C13AF7D7E7EB12803043BDE448FCC2D
SSDEEP6:GLxN82GHe1RvA75fKSMlGde/Ap2dZII1Sx4cXUVEC8FQ6N48ZiaGpcEBNg7HIv:EN8wc5jMlGdfMPcSEA6+1BNkHS
TLSHT1C0E0F1F30393B7233CF14AA9510C31849F1B18D4613722B408544C16E207812B2826F3
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.gz
FileSize642
MD5F0B28350E1E2A694631799991576927A
SHA-100E8DFADFABD41BF89D5AB55A041C881CCE06D66
SHA-256564B1C505C6FEE8F67AE0B48AA02ED972884C31677511AD374AE0C308769CC30
SSDEEP12:XgxQwifeaD1jTjpo+Vo3KCDl0ZyuIQY1XBeXgVMleVFz4X6LS5n9eN:XgxEfea5jTVw3KCDiZ6TRsXGMM34Xv5U
TLSHT102F068E37158A0CC89ADC2F57ED4509D0F6EC37F1C44090351E5464A71B4C9A661CB53
Key Value
FileName./usr/share/man/man1/topdiff.1.gz
FileSize1427
MD58508CB11FB0062732D842992C0F5103F
SHA-1BDE443625DCA168A2E7B457750FF4A3B42BA6CB5
SHA-2564451147E24F8EB7B0C1796C7D247615230DB170690A00B5E9D89099FB0896A9E
SSDEEP24:XDTVR9+7cKMqh7f4W6vUqXBZz8zqz1RUWBoyg5mnfw9Qnt/9RqJEvlwCEIs9R:XXKjhz4/XBZzj1ewo6ptSJEvyF9R
TLSHT1FB21C93C294C4A39CFDFE655292101AD9611A40492A1366EB509C5F0CF663BCA679573
Key Value
FileName./usr/share/doc/toppic/copyright
FileSize11547
MD544023D008A494F53E0A77BF27858AD33
SHA-104B3862797896C9D46DEC86867C000B36D5CEB17
SHA-2566A4EF227AE9B870F453F68F6BCCE2490EBC0969509B74B3E63E4F999AD8FDFF9
SSDEEP192:3mD8TPzHbvt6DeOXQH+TQHanHmTQrs6r1P3H3JajmbM2IOrXijoLt3i73hU9pjSK:3+8TP/vQDnXrT5kQrsINXJMmbfPrSjAz
TLSHT11832C71EBDC00B7309DC1AD2BA1D64C9B12AA41F7A668ACC645EF2150BB741DC0F6377
Key Value
FileName./usr/share/man/man1/toppic.1.gz
FileSize3706
MD551FBC0160B68799D7D6FA1F9C9BA1936
SHA-1A927CC04971DBEACBCE28ADBE20D876068D9198D
SHA-2566C5B9F79EB72EBC28F8317179A26C058F199DCF8FB90D53E78B12625714D2A6B
SSDEEP96:B6xe0FBZWYnxj6r1hIL0tVjjhhetKLb00leq:B6xBnZWYU1hKymULb00Mq
TLSHT153717EAD3A874C40D25FB2CAC0C7A912EB36C20FCDE8F8F5255E75353159B541205999
Key Value
FileName./usr/bin/topdiff_gui
FileSize2791544
MD52F977F8912877524D5B4F46B0C1D2803
SHA-1A6943BE4A1D5630F5BDBD78015D6214558F36B7D
SHA-256B40B2D41FF263C18C8CE2C952D9C55C88A7E77310D19860A7317A637CBAE6F6E
SSDEEP24576:GELq5sGJGSObMr0EVs64MC2KpUeAJ7HRUrqavEmVDzBCF+lHiatNfS8HuqKfP/:1uZBCt7V2mKfP
TLSHT165D53B957B845F3BC8EC8FB1DC36E379096D2C53A4454D2ABD940E8C9B276CE0B87885
Key Value
FileName./usr/bin/toppic_gui
FileSize4265624
MD5CB04BD92AAA703B3C7C325B045A671CF
SHA-1E1DF6141C67A17D4F75B716AF64CEC66F92BE44A
SHA-256863DE57A84CD9AAC7D5A81ACF8F6F41A7159416634C4470FAA854BA6FD0E4D8B
SSDEEP24576:06Vt7ROArxxc1QxT46ep6iQKFH2BlgLgUH7qkw/KLrzSgf2QdNGYxX+:06VdROmTVT/K9Qof7qKzSghG
TLSHT1F7160A557B889F2BC8EC8FB5DC3AD27A009D2C83B4464D267DD42E8E9B176CE0B42D45
Key Value
FileName./usr/bin/toppic
FileSize4092736
MD55BE4FD810FF419A09707B0CBBA776794
SHA-17C1A1B61448820B47542A6A00A7518D50DFD7999
SHA-2569CF26621BFBE59ADBCBB958253788CE5370B81AC864FD0446AACF97EC20A0367
SSDEEP24576:YT0TbVeHGt2a+1iY4Ebr0MIcH/2JCw9gYd5CkwTV2Wog1afegvqUTxVc:YoTbr2+4BOgwiWuTWgAfegb
TLSHT1E2161A557FC45F6BC8EC8FB9DC3AC276006D2D83B0464E2A7CD11A8D9B276CE0B42959
Key Value
FileName./usr/bin/topmg_gui
FileSize4345424
MD5FCE4298344F0CB0B4D43A909712B2AEA
SHA-14DB0F796828CADBC03DA8285D2DC3259BE2B1EA9
SHA-256F7AAE66F1B372C2780C98E8A4A6FD224B9BF4C115882DA9B1D9C6C309F26189D
SSDEEP49152:m+B3XjnTOLAqSb0VkuQBC5oid6MDGGksN2e:m+JjnTOLAqSb0CuQBC5oiEMDGGtN
TLSHT17A162B457B885F2BC8FC8FB6DC36D37A005D2D83B0554D2ABDD41A8D9B1B6CE0B42986
Key Value
FileName./usr/bin/topdiff
FileSize2702112
MD54F9AE07FC30931DD487F1F935CB0D1DE
SHA-192DEE175A3BDC6DF7F3DA2BE64AD53A4B667214C
SHA-256C1AEB5250C3ED5D8EE7F2B2AF431A723F63CE9166CDF3A62DCB5FAE3D9A25A34
SSDEEP24576:X+zums56IyxDBffgSGcwOTzqjmW2bQAOD:XIu2HbfNRzmrFA
TLSHT117C51949BB841F6FC8ED4EB6DC36D375019C2C43A4590E2ABCD40A8D9F676CE0F52A85





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