Result for 9E029F1C1718DA9596D54843A96CE648C027CB69

Query result

Key	Value
MD5	8B1409621F2B9679CBC24B300BDC3305
PackageArch	aarch64
PackageDescription	Rsolid is an R package for normalizing fluorescent intensity data from ABI/SOLiD second generation sequencing platform. It has been observed that the color-calls provided by factory software contain technical artifacts, where the proportions of colors called are extremely variable across sequencing cycles. Under the random DNA fragmentation assumption, these proportions should be equal across sequencing cycles and proportional to the dinucleotide frequencies of the sample. Rsolid implements a version of the quantile normalization algorithm that transforms the intensity values before calling colors. Results show that after normalization, the total number of mappable reads increases by around 5%, and number of perfectly mapped reads increases by 10%. Moreover a 2-5% reduction in overall error rates is observed, with a 2-6% reduction in the rate of valid adjacent color mis-matches. The latter is important, since it leads to a decrease in false-positive SNP calls. The normalization algorithm is computationally efficient. In a test we are able to process 300 million reads in 2 hours using 10 computer cluster nodes. The engine functions of the package are written in C for better performance.
PackageMaintainer	Fedora Project
PackageName	R-Rsolid
PackageRelease	30.fc32
PackageVersion	0.9.31
SHA-1	9E029F1C1718DA9596D54843A96CE648C027CB69
SHA-256	43100F59B0A7C5ECC67605C121E0BAAB13BAE78F4303B086BC498A4FD9338409
hashlookup:children-total	24
hashlookup:trust	50

Network graph view

Children (Total: 24)

The searched file hash includes 24 children files known and seen by metalookup. A sample is included below:

Key	Value
FileName	./usr/lib/R/library/survival/Meta/features.rds
FileSize	132
MD5	8F5DFC95B9840B8D958C0AE361FDD699
SHA-1	0F8D3710372B416B9171F8BFF4B4D27A029DEF69
SHA-256	BF3D989E0D145DE624F1757745111B8CCC9A1671F60C64472B183CA47C639D1A
SSDEEP	3:FttVFDYBJWOjf9haZkLgLX3HLZJcvHRmeX3F4ju5M9ln:XtVFkB8OJhhLgLX3Vu0KCKM9l
TLSH	T119C02B04C3536095C1CC003003DC0EE0882C18A893C4186D2024305430800744EE09C8

Key	Value
FileName	./usr/lib64/R/library/Rsolid/DESCRIPTION
FileSize	653
MD5	964250CCA1D36ED90F49CFB75799C4F7
SHA-1	16B0B872C533E72F1C4935F56E15604178F91049
SHA-256	2B7FBBEC2A673A374BEAE7FA3A45728B5086AED828663DF3500162E3FB3C1D3D
SSDEEP	12:06+QWtHbrXFFMB2X+5XaLzcSDx1JvLyLns2799Zv5PX7JFeMfjpViFbJDHEhdNJD:ontPXFF7u5WDx1JvmLnnDZv5lFe6pAFA
TLSH	T1D6F02302DB67E3A0E907438E0CF4CBA98A349153778D5468FD9E5C108E0035121A32E8

Key	Value
FileName	./usr/lib64/R/library/Rsolid/INDEX
FileSize	175
MD5	D454BC562761C02412D381C9A347C69C
SHA-1	177007733670BF451339D4FB30F6C2632B2E4258
SHA-256	BC1CD3489BA8A37B576D916B24400DF8A7F231E00DB0D0981B1AA4CA93CF557D
SSDEEP	3:Yp//aLRMJgVEJw18KElKXvGQ1xWxQT3/bCFY:sMMBJ+8KrXvaQTCY
TLSH	T176C092B3E2984E22A93BA15758C88BA041B572333B4A6A8F7C1EA4401B4206036367B8

Key	Value
FileName	./usr/lib64/R/library/Rsolid/R/Rsolid.rdx
FileSize	348
MD5	0FACE82FF6E37FD42DBB1C6186139F56
SHA-1	18BDD81FD51ABFB05F6AD2C67A87FB5EFB97CAA6
SHA-256	742810BF8263FA8E0DD84D94CEA6421B0FC428C6EB20D26C40E16D4555AC1728
SSDEEP	6:XtfuiThMcj4Nq7EZyUgbwSALc96J6U+SEEaEbQ3oqZq4abb7km7pnhlZNwgk7O/z:XNzThML47bUgbwS996JDhaKQ3oqKb7k6
TLSH	T1AFE0C0370A371442F1AA2478C410954CB334467BA40E697F87DC0586254F175C4C116C

Key	Value
FileName	./usr/lib64/R/library/Rsolid/data/prop.Hs.rda
FileSize	97
MD5	2ACB03264FA6AB75C0F89FD9FCA99975
SHA-1	18F0EB0CC822D137117CBB2B77E065E1417DF61A
SHA-256	D531C4D7D7107A4953A560CE5897AF646E1A1D8EC05D462E8C6474F850140BC8
SSDEEP	3:FttsdFtD3L5WS1KKmrOrDOIJ/n:XtgLUGPVJ/n
TLSH	T1C6B01298808A3410D0CACC312010099A11D7B401461C2CCAA2200199C0982C7CB5D92C

Key	Value
FileName	./usr/lib/R/site-library/effects/R/effects
FileSize	1056
MD5	EBF0FC819595D631B8BF280C4B049940
RDS:package_id	182052
SHA-1	1E3082B0E541341846B7B27EAC2126CAFB0E00B9
SHA-256	2FB8B16BE23C820DAF2E51B7DDFEF61CA4978E561B1D228D546D1B356041F79E
SHA-512	A427BB0442BB076EDD389C8553F618B54605012BDA8E62409CA657C7B000404E9E45684C03C2F4444C331A994BB48C98892DECED8153DF04654982EBF900F956
SSDEEP	24:dh2pvjejSRmcyAOkHjlnAJAcEWrwYahkB1OOV0Ea:dijeuR5ysHjuecZVHC
TLSH	T13911208C6410D6FB6A0104853C4F12CDE21B6763729DA091300DD52F7B09E7562F6996
insert-timestamp	1679428382.0662453
mimetype	text/plain
source	RDS.db
tar:gname	bin
tar:uname	root

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/Rsolid.rdb
FileSize	2780
MD5	19B6C761BBCD15BFBD8D4178B2C9B384
SHA-1	2DD10FF77B24C2648E7E85DA265206166CD05487
SHA-256	CC53CBD4847606E1AC625C0B1779927399DA5BB5139803832BEA54DFE32F621F
SSDEEP	48:IWP5ywlbguKqwSwYseIKcnSoBUMA7eWAFvxY1pksZ8eCcR8WNhA01gxDy3:Iu5PlkRqNJseSlUMaeWAFve1pkO8Dc9j
TLSH	T1645118BE7BC86391D59D3C404395F0F6D8398F14B859B913AB1C397B6EC88EA2734610

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/AnIndex
FileSize	14
MD5	27F86373197F07D636A5545AFF2255A0
SHA-1	47E504EE5B5100037DBCF1809EA13D94F84AB65E
SHA-256	53F18991FDEA62AB48EBCF22AEFE84CC4E79DED71940693E17D1D9D156BFD282
SSDEEP	3:Y8cv:le
TLSH

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/aliases.rds
FileSize	88
MD5	7D361838472A604AB60CB7722E287124
SHA-1	53496752B00CF8412F9FE6525A64F3D9A5C9B036
SHA-256	6BF8E18BF010267C6958155AB5EBB84BA0A71BE0570DFB10A1643DEC46631CBE
SSDEEP	3:FttVFDYBJWOjf9hdHJXl/KJSQPCfmAtn:XtVFkB8OJhMJ5Cf3t
TLSH	T18AB0124403190100DF8C4431839506806E883CE2D2D0441F180400086180222CDD2F9C

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/Rsolid.rdx
FileSize	167
MD5	3F4D856F8EDACC279BF1DA27C9C6A44E
SHA-1	572B0B42FC922AFF6BBE4AEEDA91A2648F89C3EC
SHA-256	FCD3CD80569D0A1B46E8680F5A1A893FB96C44161F553F1BB8E8E13B89E22F2B
SSDEEP	3:FttVFDYBJWOjf9hSjnU8kClm8jJkp3HfDrdAzqXmtku3HmWmjhIJ2krTUhl/n:XtVFkB8OJhOU1V8jJgVSn3mjuJ2kQn
TLSH	T167C08C590E598B82C52EA82896089B438888DBF5ECA08BA90DA2016CA8981102AD11DE