Result for 9B2DB575A3B1FFCC7B95828846E7B9EED1928940

Query result

Key	Value
MD5	D708B0537C8E3BD54C07A6B11D3EF203
PackageArch	x86_64
PackageDescription	Rsolid is an R package for normalizing fluorescent intensity data from ABI/SOLiD second generation sequencing platform. It has been observed that the color-calls provided by factory software contain technical artifacts, where the proportions of colors called are extremely variable across sequencing cycles. Under the random DNA fragmentation assumption, these proportions should be equal across sequencing cycles and proportional to the dinucleotide frequencies of the sample. Rsolid implements a version of the quantile normalization algorithm that transforms the intensity values before calling colors. Results show that after normalization, the total number of mappable reads increases by around 5%, and number of perfectly mapped reads increases by 10%. Moreover a 2-5% reduction in overall error rates is observed, with a 2-6% reduction in the rate of valid adjacent color mis-matches. The latter is important, since it leads to a decrease in false-positive SNP calls. The normalization algorithm is computationally efficient. In a test we are able to process 300 million reads in 2 hours using 10 computer cluster nodes. The engine functions of the package are written in C for better performance.
PackageMaintainer	Fedora Project
PackageName	R-Rsolid
PackageRelease	30.fc32
PackageVersion	0.9.31
SHA-1	9B2DB575A3B1FFCC7B95828846E7B9EED1928940
SHA-256	C34F819FFFCBC2541107A33022E5929FEBE02CB4B42BC5523DE834FA26235A92
hashlookup:children-total	24
hashlookup:trust	50

Network graph view

Children (Total: 24)

The searched file hash includes 24 children files known and seen by metalookup. A sample is included below:

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/Rsolid.rdx
FileSize	167
MD5	DDABD357122E9B0A05641D539292B89D
SHA-1	049698B9114DAC4167B3BBBEB19249E2BF7A660B
SHA-256	E9CDB539DEF5E2B83CDC5659A87A79994261F1020CA64C8AABA81E045E2CA077
SSDEEP	3:FttVFDYBJWOjf9hSjnUnfA8jJkp3HfDrdAzqXmtku3HmWmjhIJ2krHqln:XtVFkB8OJhOUno8jJgVSn3mjuJ2kul
TLSH	T10DC0800C19594691C11D54345604D6431444CBE5ED9045940512006CB4DC0102BD11CD

Key	Value
FileName	./usr/lib/R/library/survival/Meta/features.rds
FileSize	132
MD5	8F5DFC95B9840B8D958C0AE361FDD699
SHA-1	0F8D3710372B416B9171F8BFF4B4D27A029DEF69
SHA-256	BF3D989E0D145DE624F1757745111B8CCC9A1671F60C64472B183CA47C639D1A
SSDEEP	3:FttVFDYBJWOjf9haZkLgLX3HLZJcvHRmeX3F4ju5M9ln:XtVFkB8OJhhLgLX3Vu0KCKM9l
TLSH	T119C02B04C3536095C1CC003003DC0EE0882C18A893C4186D2024305430800744EE09C8

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/Rsolid.rdb
FileSize	2773
MD5	CBEF63E893295E51513B9A7D465C16D4
SHA-1	15632EA606B907224A4D1AB7894B071CD8333955
SHA-256	43157728134B2881AFE021ADA9F289D5A6CB63D7648738A61E4659E58223D04D
SSDEEP	48:IWP5ywsxLmNVg0qaFp7RqDlR2yvVIZom3JaUX4+NWu3IPIMmDS925V+Epnh0l0Lz:Iu5PFe0FSDlnNIOuZND4IFDS92z+Eq+z
TLSH	T19B514C743CCD21F6635E4A697305C55FA46E4EAD7181E049F2EC8F0C133136CB495596

Key	Value
FileName	./usr/lib64/R/library/Rsolid/INDEX
FileSize	175
MD5	D454BC562761C02412D381C9A347C69C
SHA-1	177007733670BF451339D4FB30F6C2632B2E4258
SHA-256	BC1CD3489BA8A37B576D916B24400DF8A7F231E00DB0D0981B1AA4CA93CF557D
SSDEEP	3:Yp//aLRMJgVEJw18KElKXvGQ1xWxQT3/bCFY:sMMBJ+8KrXvaQTCY
TLSH	T176C092B3E2984E22A93BA15758C88BA041B572333B4A6A8F7C1EA4401B4206036367B8

Key	Value
FileName	./usr/lib64/R/library/Rsolid/data/prop.Hs.rda
FileSize	97
MD5	2ACB03264FA6AB75C0F89FD9FCA99975
SHA-1	18F0EB0CC822D137117CBB2B77E065E1417DF61A
SHA-256	D531C4D7D7107A4953A560CE5897AF646E1A1D8EC05D462E8C6474F850140BC8
SSDEEP	3:FttsdFtD3L5WS1KKmrOrDOIJ/n:XtgLUGPVJ/n
TLSH	T1C6B01298808A3410D0CACC312010099A11D7B401461C2CCAA2200199C0982C7CB5D92C

Key	Value
FileName	./usr/lib/R/site-library/effects/R/effects
FileSize	1056
MD5	EBF0FC819595D631B8BF280C4B049940
RDS:package_id	182052
SHA-1	1E3082B0E541341846B7B27EAC2126CAFB0E00B9
SHA-256	2FB8B16BE23C820DAF2E51B7DDFEF61CA4978E561B1D228D546D1B356041F79E
SHA-512	A427BB0442BB076EDD389C8553F618B54605012BDA8E62409CA657C7B000404E9E45684C03C2F4444C331A994BB48C98892DECED8153DF04654982EBF900F956
SSDEEP	24:dh2pvjejSRmcyAOkHjlnAJAcEWrwYahkB1OOV0Ea:dijeuR5ysHjuecZVHC
TLSH	T13911208C6410D6FB6A0104853C4F12CDE21B6763729DA091300DD52F7B09E7562F6996
insert-timestamp	1679428382.0662453
mimetype	text/plain
source	RDS.db
tar:gname	bin
tar:uname	root

Key	Value
FileName	./usr/lib64/R/library/Rsolid/R/Rsolid.rdb
FileSize	15310
MD5	FD546B3B1D1767071E25318093D6C90F
SHA-1	447C92851B45BE89D1141F5DAF59BC178DF1FC1F
SHA-256	DDC2A4B60D7EBC5E15C9C3857C86159C7163D53C0A155A2894CD3B448CA44CEB
SSDEEP	384:RHkHf8GzV89CCibxhR2o4oObNqhIWd7MG1lF:GHfpViVOFMJbNqhIWFMG1lF
TLSH	T1BA62D0B8131635289DF4EA30D964332ED9DA84BBFD85841A3A71C5F6D0070224FEB15C

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/AnIndex
FileSize	14
MD5	27F86373197F07D636A5545AFF2255A0
SHA-1	47E504EE5B5100037DBCF1809EA13D94F84AB65E
SHA-256	53F18991FDEA62AB48EBCF22AEFE84CC4E79DED71940693E17D1D9D156BFD282
SSDEEP	3:Y8cv:le
TLSH

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/aliases.rds
FileSize	88
MD5	7D361838472A604AB60CB7722E287124
SHA-1	53496752B00CF8412F9FE6525A64F3D9A5C9B036
SHA-256	6BF8E18BF010267C6958155AB5EBB84BA0A71BE0570DFB10A1643DEC46631CBE
SSDEEP	3:FttVFDYBJWOjf9hdHJXl/KJSQPCfmAtn:XtVFkB8OJhMJ5Cf3t
TLSH	T18AB0124403190100DF8C4431839506806E883CE2D2D0441F180400086180222CDD2F9C

Key	Value
FileName	./usr/lib/.build-id/98/ef8336e02e2c07b91b22320b00c2560a5864bd
FileSize	53
MD5	3106C543D20A5C2B8AF97441B57B6CAD
SHA-1	725D0C96DF1AFECD00C49C7B066CFEADD7E3653E
SHA-256	BE1E44CBA68BC18D7C4F96563EB1EA0B383FF1B7FB5D55AF24AA38CE75F9B601
SSDEEP	3:gCD/KK+WJMYGN3on:X/R1CYGlo
TLSH	T1AB9002318E3D222073F368480C300C0C2FC13C043209AE1C048D057E430B54401015C0