Result for 5D9D558683F73E8FA1C17C56552B64C99495AB80

Query result

Key Value
FileSize2539640
MD57CAAA7A323CF5D55EBA39D1AC8873FDE
PackageDescriptionImmunoglobulin Clonal Lineage and Diversity Analysis Alakazam is part of the Immcantation analysis framework for Adaptive Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of tools to investigate lymphocyte receptor clonal lineages, diversity, gene usage, and other repertoire level properties, with a focus on high-throughput immunoglobulin (Ig) sequencing. . Alakazam serves five main purposes: * Providing core functionality for other R packages in the Immcantation framework. This includes common tasks such as file I/O, basic DNA sequence manipulation, and interacting with V(D)J segment and gene annotations. * Providing an R interface for interacting with the output of the pRESTO and Change-O tool suites. * Performing lineage reconstruction on clonal populations of Ig sequences and analyzing the topology of the resultant lineage trees. * Performing clonal abundance and diversity analysis on lymphocyte repertoires. * Performing physicochemical property analyses of lymphocyte receptor sequences.
PackageMaintainerDebian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
PackageNamer-cran-alakazam
PackageSectiongnu-r
PackageVersion1.1.0-1
SHA-15D9D558683F73E8FA1C17C56552B64C99495AB80
SHA-25677288F17E091A9E5DF0A138CC25FC4D0CFD1C7FFEDC4FFB526DC38CA3F7877FD
hashlookup:children-total57
hashlookup:trust50

Network graph view

Children (Total: 57)

The searched file hash includes 57 children files known and seen by metalookup. A sample is included below:

Key Value
FileNameusr/share/R/R/nspackloader.R
FileSize1058
MD5D6C68F1FE41CED6E98A766A3757313DA
RDS:package_id293685
SHA-112C0D3D6E3F5B5D749C93FECA122CBA34B466AB5
SHA-256570CA456B280CDEB201EF5EBDF22DC8F80092E2C0C68E33C7F73340E420F3759
SHA-5126824A8335BC36AF7808471FE603E2C4FC7B77BD08D61DF060B80444424563B0764DE87AAD8D6D20E926D02AA20E22528FFA8ED517AF5F35A01ACFA8BD2A90590
SSDEEP24:do2pvjejSRmcyAOkHjlnAgAcEWrwYahkB1OOV0Ea:d1jeuR5ysHju3cZVHC
TLSHT1FB1142886410D7FB6A0104853C4F22CDE31F6723729DA091300DD12F7B0DE7552F69D6
insert-timestamp1728198681.437601
mimetypetext/plain
sourcesnap:VCjprGsSZiPuV3CmQViE4TvPMKTOlaiL_119
tar:gnameroot
tar:unameroot
Key Value
FileName./usr/lib/R/site-library/alakazam/R/alakazam.rdx
FileSize2111
MD5BF82B38EC7C7AF9B34550BEA7245E40E
SHA-11722CE5BC8B58CBB36C5CC95DE9712228E5E42FB
SHA-256D579931AEBB02A7411A9C4CA5109898CE0E3E6D1F6A198AD69A4E1C8DFE6A238
SSDEEP48:XxyOosTgyjDcyJVvaHpbrtEjq6Yhg66uYPPQl6x+XHy:zosRjDcyJKftEqRujtvxoHy
TLSHT1DB411A58E97969B775CD12C222C03B736AF35CCA5D954C96F10DB71769A2D10B3CC094
Key Value
FileName./usr/lib/R/site-library/alakazam/doc/Fastq-Vignette.pdf
FileSize171966
MD5A5D9849DAAE3AAB81984FA270AD8ED92
SHA-11A09080D37C5C552ADFF5E62A43AA35FFE6A3DC8
SHA-25669FBC207DD2A2BF7D6B3F8DBC216F96B7E3DC0D6D06BEFC2FEE8369B1E10B9DB
SSDEEP3072:rqCJk4jW3CVWJWxtFLob3/o9+4IG9+bH38S8eozzl2RZ3RDz2IQiyEy:rqCS4jPVWwHFLEAk7Lovsv3RDz2IK
TLSHT152F322950A6A7C0D832E75A2B96730748BED75231B0B447DF452AB438F2DD874BC8BC8
Key Value
FileName./usr/lib/R/site-library/alakazam/libs/alakazam.so
FileSize76060
MD5A5988FEAD152EE221BC07E848A78DA0C
SHA-11DF1E66F696340CE6E58C353CCA19AF7FC228B23
SHA-2566924D8A3E6BDB53057762AA17C90CDEC2FF0F535353899B28BA37999044EE26B
SSDEEP768:3+/NHvmjaE1upSYSbCV+HsFaEuGWAiO0G11hleQvLazj+DwswUzba7P+MdoIHY1N:wiaE1wpSbiNFfiO0id0X+DwswUzeT+M
TLSHT183736B82F4DB8E63CDDB137860835E02A9654F5357DCABD2E901DC384D20B59AB2EF84
Key Value
FileName./usr/lib/R/site-library/alakazam/R/alakazam.rdb
FileSize276177
MD5E25334669C30E472E8BFC891FCA19032
SHA-1233739F663FE5080BFCC923889BF28B4C80ED3A1
SHA-2561EF77852EA88E0C653431ECF297AB75ADDF2C97CDC8369C6DF95161575AE2909
SSDEEP6144:hFu0Qoy14ZUTRSqLF6Edq4NAGinPlRjgJRQkcS/HqqU:T55ZKSqljLinPfk9W
TLSHT17D4422C6DE3416921A338EE2CD6E53BE66CA4753914A51F01F61DE19C030FD2AEEC879
Key Value
FileName./usr/lib/R/site-library/alakazam/Meta/links.rds
FileSize1428
MD5D46449BC7834931C6746B3672E3373BB
SHA-12341F2F8F93CBB64993B0093DB7ACA1B872C53A5
SHA-25683C90A2B36EEE5AF7548F99E81224996BF80A949611DDECDDB45EB28C1C43D5A
SSDEEP24:X+IPdZOd4qgdCjwJmn0CCm5N6W/xaDwz4sztO4LKuIjH:XRm0yP6W/xmQ4WtOe9C
TLSHT1F1213BE0156B90F5F7B9C537C1E0C725287628881BBCF2E834828A62EAE4004EB5913E
Key Value
FileName./usr/lib/R/site-library/alakazam/doc/Lineage-Vignette.pdf
FileSize221913
MD5902255714674F47CEE4E6C9939998CCE
SHA-123DF2D7AEF515F7E22C3C6276469F6C6B139D01E
SHA-2566750E59D614E35DB96B26B2547187E6E290C9C2A052A3A6939E9CCE8817565F2
SSDEEP6144:I8fSdJnZKm9Q3yruLUCEITFVfuz7aHJwl7LJ0pMT3:I8fSdJZKmmCqhEgnWXi8x0+T3
TLSHT1202412E7F765944CD453DC22F98B720B98C750951E3B4878B8F88E903A4EE8451EA7CE
Key Value
FileName./usr/lib/R/site-library/alakazam/Meta/Rd.rds
FileSize3276
MD5A5158BA69D1756F1EA73F5313C6EFCEA
SHA-124F82B782734256859F74B5585AF67CE20B3084E
SHA-2567CF8EB286649713A097EED8CDC036A63F450AEEFAA0939A5D237007A17A3C44E
SSDEEP48:X/CJwAVT8MH5sRtk+vrNUh/293DyeoJlvzdtJ86zvu3Z3+eQD0vir20y5gTKOrBO:v8NlH5C1Uh/43mvlja0mp3VQDCFjYu
TLSHT148616D505016883EFB44A2287D7E598AA5F61AF6F9BC70783C2C11FD5F084914EE04E4
Key Value
FileName./usr/share/doc/r-cran-alakazam/copyright
FileSize35802
MD5621BCD5CD06806BD208EAA379C83E466
SHA-1293FD9DBCC780114833E66B387012A85F98067FD
SHA-25698B8C357677FEE122B3564EC2CE9F32F199339D4D3853B061713FFEDDA120DF8
SSDEEP768:/EwGBfvjkbfWHMTSFx8CFviR9cRanTrNs:/EfAuBDFqcX
TLSHT1F9F2635FB74413B2028202916A8B68DEE31AD03973764495B85DC15C27B7E3583BFBED
Key Value
FileName./usr/lib/R/site-library/alakazam/extdata/example_airr.tsv.gz
FileSize192178
MD5B8013C3C77BA0B0D826A0D2C0625903C
SHA-12BC42155DE46200D58453DB49E37B888A97E59C9
SHA-256F4E9E2E773094707DA88F9188C8E8CCCA96082C6F33DF7EB451BA3A674ACCEFE
SSDEEP3072:IrbXVGfCAcVvHioIz4ivGwla1Hr7aCuWMYbCMB5pUVGl+FBV4p6euN7pCmhEbIDX:IrbXYfkIzjvGmalucCupUo+FGWBpHEI7
TLSHT1891422986444E0BA8F395F8F09F7331892DA05A08292FFD7E896B36B972411433D1E3D