Key | Value |
---|---|
FileSize | 636848 |
MD5 | 6E4061BED3903DEBE1E4B7641AF55755 |
PackageDescription | Bioconductor resampling-based multiple hypothesis testing Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | r-bioc-multtest |
PackageSection | gnu-r |
PackageVersion | 2.30.0-1 |
SHA-1 | 00524583C48D7B173E1E859794C0963339A52484 |
SHA-256 | E89D8690422A0AEA87758081DCF7072E5E77F7444D6A374CDFBB20A7D2F39280 |
hashlookup:children-total | 27 |
hashlookup:trust | 50 |
The searched file hash includes 27 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/DESCRIPTION |
FileSize | 1890 |
MD5 | B1EC8F629101BB5B7045E3D087BBA3DC |
SHA-1 | 09EED18A9EE4D289E443EFCA6ECDCA9EAFF077BE |
SHA-256 | F418597F1BEB3EEF3023DDD91C912D8801714E6BF2423C4F0F5C290EA7D59969 |
SSDEEP | 48:gnKUVHOdmTrSOAynFom00yL/cwnfjQxesuDeJzUPTmjx1:gnKoH9TrSOXyTccVsuDeJ4PT2n |
TLSH | T18941EB12F54315360A8701CEA51B1FE3DB28809B77611594FA4D171B3F4ECAD7177328 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/effects/R/effects |
FileSize | 1056 |
MD5 | EBF0FC819595D631B8BF280C4B049940 |
RDS:package_id | 182052 |
SHA-1 | 1E3082B0E541341846B7B27EAC2126CAFB0E00B9 |
SHA-256 | 2FB8B16BE23C820DAF2E51B7DDFEF61CA4978E561B1D228D546D1B356041F79E |
SHA-512 | A427BB0442BB076EDD389C8553F618B54605012BDA8E62409CA657C7B000404E9E45684C03C2F4444C331A994BB48C98892DECED8153DF04654982EBF900F956 |
SSDEEP | 24:dh2pvjejSRmcyAOkHjlnAJAcEWrwYahkB1OOV0Ea:dijeuR5ysHjuecZVHC |
TLSH | T13911208C6410D6FB6A0104853C4F12CDE21B6763729DA091300DD52F7B09E7562F6996 |
insert-timestamp | 1679428382.0662453 |
mimetype | text/plain |
source | RDS.db |
tar:gname | bin |
tar:uname | root |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/Meta/package.rds |
FileSize | 1435 |
MD5 | C5D4C4FD58A591FCB109A8EC58D59E4A |
SHA-1 | 2D9DE511ACCC52B501B9DA521F14047FE0699A81 |
SHA-256 | CA2820F69E2BC06D6FB70643E450B6B95C193EDD431F7FFB75D9596367FB1517 |
SSDEEP | 24:XoYhtXPyfWZ12Hy8EKQSJbeInw2JftHkJy7/WtHU+h24JnLxkP75vXW+3brm:XPtafWZAS8EOJ9T/Wt0OF6VvXXba |
TLSH | T1182119AC05201E02E94A97BDC98310CD4B6E08CF0D9788901AB1A13E732C140B791F56 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/otherDocs/MTP.Rnw |
FileSize | 77980 |
MD5 | 37597F3075C6F6B48636608C36C6E078 |
SHA-1 | 2EA890A5173610C9BD0F2766ED93B9E0EBE2E204 |
SHA-256 | 4D706D2C00A62989946F0D866AD913D73F26D4C6F80D9E7D3AF6EB2035A5F827 |
SSDEEP | 1536:5dRB/BBbVCdwqAqcAUriMBYapHz+6E0HJYZoDuk:5dRBpnC3AqcA8nB9pHz+6E0ptr |
TLSH | T10A73B813B64293722A8310F8955FC1E8E32AC0EFB371159164EDC66E5146C798E7B3EE |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/INDEX |
FileSize | 1520 |
MD5 | 02DAAB31199C69A9A0AD892B10C6449B |
SHA-1 | 3F61A0A91F88EFB472D6BC7C1D3A37374C95BCDA |
SHA-256 | 92202939170C22F54E66F85824153D0312904F5D958C8CF979F3080E5B112352 |
SSDEEP | 24:3IWrXtABMeWH2X61uaxbGa1Kk38Kf68REh2fU:YWrX8MeWH2XglxSa1SKf6JF |
TLSH | T10B31F01BF91FF32C47E700C997AF02AE711D804B57501A86F8BCC2B25BCB42D99916B6 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/Meta/links.rds |
FileSize | 888 |
MD5 | 8D0FB7A6665FFA729029BD80DBE44612 |
SHA-1 | 4A81DEA46D296160C9CF50C49F18C5C29215852F |
SHA-256 | 62AB5B354C3B050213AC1BB86C2A2B2874F8F523628CC0673986284CCEA2C75C |
SSDEEP | 24:Xo3Opeu3l7G0OHpCox30JutfnYcaqJlRHjdC+Hbes/+q+6mrjPb7:Xoe9lS9QoxXfYcr7dxz2lPb7 |
TLSH | T1DB11B798084CB57454F014D8DE03C596FC24B9FDACC0CA9D1CF6BC0EB2A04D126C4720 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/NAMESPACE |
FileSize | 1233 |
MD5 | 1C0EC563F421E2C7588CAC2508B4900F |
SHA-1 | 4CC424200729581EA9FFC3609EAE3F3C3546EBB6 |
SHA-256 | 79DF9F66CD54FACE2D5974C074A36877EEFAF645151702061DFB344F8254AC68 |
SSDEEP | 24:frVd1Rodyn/jyDUUDc+7iE0OAAplLh6D2h+eFBsrb9iQIkxGqick:zlRFyA+7iRALf+e691IkxLrk |
TLSH | T17421E71790F301110FD1B4FBF6309DB28B35C20EB7800A9A8A28FB3A5A01C69F4E8169 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/help/multtest.rdb |
FileSize | 163795 |
MD5 | C2F2C301C8C5931C3232E179472F089C |
SHA-1 | 525D118ABE06D84F0A802CBE70CEAC6469C988E5 |
SHA-256 | 46D9B10C3FE3BB223D53B90A3A0502E7569AF7E063912EDE3383A5D072D8CBD4 |
SSDEEP | 3072:MWx6Pa6+uJmyXXKMSSVDqQJ+dvFO0o/6m/wj3DxRerOpLK9ForhQLx:rB4JmyXMeq66ONkvOOYF4mx |
TLSH | T15CF31318C7C12655EAF09AE00C8716CBC563D746FC228DF09BFA1BEF28216758546DE8 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/help/multtest.rdx |
FileSize | 607 |
MD5 | F3BE7C5D033A25C44949F0D7627C0E6C |
SHA-1 | 60428377FB01E69031E413281DB2C461FDB4C4E1 |
SHA-256 | 541D24B75E47B01A29A48192FFCFC9404E69F7669B4B5D79B35F859A2C1864FF |
SSDEEP | 12:XYFf0cpLYOfSl58wAfdrKrOIHbmZzGC9gBv5lCyET8C62qbNowVwLM0:XY6c9YOfSliVfpyHbmBGCarl5sqbNXwJ |
TLSH | T1C7F062C0BEE0052F3D196AB7F290E0610B3CC026D4956192D00234A1350CFC8B19C485 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/multtest/otherDocs/multtest.Rnw |
FileSize | 13957 |
MD5 | 9DC547C1FB857716F446FD96396B635C |
SHA-1 | 708196B793342DDADBDCB011735F4DE9BA22FC51 |
SHA-256 | 5EBF781645095094483086E416DD2964F596D5490732763771AB377C09091887 |
SSDEEP | 192:KKz75li0AzX6YR8pydZoANvkDhmu0PAghn4qQhV8c8ALpt7f1HO9M90mmQkX:KKniXqs8cqovkDEYgd4xkAbf1AZH7X |
TLSH | T14C52E533F51B5721371B10B1997F44DAAB19D0DBB3B20C59A49C8176034682D8AFBBBE |