Key | Value |
---|---|
FileSize | 2815536 |
MD5 | D90281686E8FF9F6E52616984A757ABE |
PackageDescription | efficient phylogenetic software by maximum likelihood IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others: . * A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014) |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | iqtree |
PackageSection | science |
PackageVersion | 1.6.9+dfsg-1 |
SHA-1 | EE9F3A94FFC28094140042A0281522629891666E |
SHA-256 | F4BD65BE6A2A119A11454E817B7719FEEDE89EB0FEB4A272385E5267C325813A |
hashlookup:children-total | 14 |
hashlookup:trust | 50 |
The searched file hash includes 14 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/run-unit-test |
FileSize | 2271 |
MD5 | 7E88C48674F56D170CA5504F71A8FD10 |
SHA-1 | AD1B1453A924E41463F5B778FF0ADCF8E026F995 |
SHA-256 | 0BD3BDDC9AF85F631357526CFA8A162DEE57E0DBB897CDA98D9455E12E94F98D |
SSDEEP | 48:WCdgCt/Oi65sBbk3/BisAhmEJ0WOcoHnKHXpXeX/3a5KI6VUfILUVTan:RgCt3Wyb4Zi5hmEJ0WOcoHnKHXpXH5KR |
TLSH | T15D41E4188348F0387402E65C65B931D246E9520DCFA49E6744C47A263CE8D9F77FB7E1 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/models.nex.gz |
FileSize | 50589 |
MD5 | 92CB38E853A235C3804732DCA63AF996 |
SHA-1 | 2CA1103FB8EF8503ACC923350076CCA25AE1B66F |
SHA-256 | 146C3ECF29E4CD29407B925D313BC24DC6E251D11E258C4F1EEB409F2CF800E6 |
SSDEEP | 1536:Edy7djgVw/NV4cIL+I+J+tFpHzMcaIk/1PBsa:EdVVw/NV5GCMrmIUJea |
TLSH | T1EE3301C8456103B2D1FDE8B77C36038829F5B2A92EF9BBA2F131C1135EC4E54B615C5A |
Key | Value |
---|---|
FileName | ./usr/share/doc/ncbi-epcr/README.test |
FileSize | 278 |
MD5 | 2DE4573BC735E689F789D7662AB0497B |
SHA-1 | 34200C528591A6F25552E67122DAA479F2C54753 |
SHA-256 | 661779DB6A77C9045E836BDFEBA7DFEC1A17CAF079E40B27E6E0C22242CB4312 |
SSDEEP | 3:OpKL62NMGlGmIRCvH7xd7777777777777777777777777777777777777TjvvlGr:OpK+2NHlGq7vlGkwyAK9EOMfyGYL6f |
TLSH | T1C8D0223712C688063100CC8E19898131E41DB02E723800C02928391C97CC8324943CB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.phy.gz |
FileSize | 8098 |
MD5 | 789D2B0EC8B665A90E647F108FD02FD9 |
SHA-1 | 5DA9B670104C9230C5379E60E2BB58EA400CE6F3 |
SHA-256 | BB9DCEC98F38D9FF9D0978CCC6A54B8CD53B230A3983212D6A589095486C0FFD |
SSDEEP | 192:VbpqbtksNuBWxTcpkcngvh0ZV9OEwUoR2NEv/FAzxuqEM:VFqbSsNuBgcgvgV4Uo1VAzdEM |
TLSH | T1CEF1BF8C08F5D902B111E8C68F713ED5DD9D9404C709E3E2A4C8A95F1EC43BCCA948A2 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.nex |
FileSize | 174 |
MD5 | D064E66F36E2EFC6C441F46EA1E02BA6 |
SHA-1 | 701F6A74581E150712F7F87859DF282EABBCD885 |
SHA-256 | 359F1C6BDBAEA2AAFF49F233B9BA9AFECAD653AB68442775240E228A196EFF83 |
SSDEEP | 3:bDHMLsve0aEXWARFYWLwI4QWARFY6cDQWARFYwYaAlvvsGQVEXRQMkcPNl+Pc+MK:vJG0PB5EI4g2DgTbAlvvsNEXRQrcbN1K |
TLSH | T10EC08C124FA073D6180C8B271CAB0AACC86A1082A60BCCCC80B81CF530C3E010321FB8 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-mpi.1.gz |
FileSize | 5920 |
MD5 | 9E90C9A41F31AE0EA97E934223DE73BD |
SHA-1 | 87DB4C86FC2D262B90C637C8B71015632BAAEFF2 |
SHA-256 | 791E95141114A900D8830FD6611CBBF38D1624EA143C5112AA8A58D0C9E4E043 |
SSDEEP | 96:PQarrD2rjHFd5F1llXG4grKy7JvUiiszZ05jvH4lbzbDHpx/2+2bWtt5:xrolF1llod7VyNa3VVvtf |
TLSH | T169C18DBB619FEE3F5586FEED112BA758298EE8817172815E5C43697211160B63C2C980 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-mpi |
FileSize | 5517896 |
MD5 | 186589B1DA2BCC8D04FA7294D0E0EB3C |
SHA-1 | B48F24ED320ED3A014629E5BFF4FF6E71CCB6646 |
SHA-256 | 279B33F064A4ACE62B4B8D49444C286F0893461A0415CA36FF878456EEF7B8B2 |
SSDEEP | 49152:L/jmN0wolXGC1Vn7uu+bF0M/t7FiwfgdAXQkRE79nbBiXADu+UjINdEi/fZIV9xY:LaPu2CbA9EZFbAB7QztQ6GC |
TLSH | T165466D47F29258ACC096D434539BAAB2E520787D41743A7A3684CB311F37FF0DB6AB52 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/changelog.Debian.gz |
FileSize | 1283 |
MD5 | F01757F67D4FDB2277BCC282D1FC3481 |
SHA-1 | 55BA78B7401E2C2CADEE08BB79918F53F55707B7 |
SHA-256 | 58B183C17AC9AAE5FC8010261EB4B64760E253F238C1009B32235DBA4F25D8BC |
SSDEEP | 24:X08Ncx7EjvyZ+mk3Olh4SxGoR/ysEFWndWzKskehhwEUaJD2I:XSxgjvyEDyh4yTKsUIIk3CN |
TLSH | T18521C87C84D2F70D86190E285889C7E2428DADC79A456BDCAAA5D8E5CCD4628287DC45 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree.1.gz |
FileSize | 5900 |
MD5 | 8A27D033D1450EEEA8FC45F8EFECCACD |
SHA-1 | D200C1B779BEB95A37B42E0DB5E3CEE896E75D32 |
SHA-256 | AF11AB5B11C573D32064F7794A08B9390C6271BB56742424DD27EA82A7486CBF |
SSDEEP | 96:hp668Ni3RLS4XKQXG4sTVWEWRbTJKSnqlPsp/mBaj1M+fyb5/x2OWDAN:hp664i3RJ1kTgEWRnJn8G1M/b5/cOWDU |
TLSH | T1B2C1AE4CBA0F30D615FC0C8165CB7986D517E26271C7ECABD88793F38471967634492C |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-omp.1.gz |
FileSize | 5919 |
MD5 | 39D0EF2D4FD5DE41162CC908EC3A5CEE |
SHA-1 | BE08E64CFD8D187DB67A3659D813B11CC3BC3463 |
SHA-256 | 27BAE210ED38DBAFFFB00E61DF3309D61F116E751B874CE3857FF8D63014C6A7 |
SSDEEP | 96:PQsOYSSeGBlSKHjZG93m6Y4t0lXsG/OE6v5app/2scj78gHUVQwS:mYSStlSKH4g/7vOEi5267ZgA |
TLSH | T18DC17DF22E2514F31D91C032884CE0E54C7B965A2D00AF9E4EAC9ADC6F0DBA13273575 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree |
FileSize | 5403208 |
MD5 | 75CA4845834401D94474036051D4BA95 |
SHA-1 | C73409147C56475D702EC23C36D37F6D19CD083F |
SHA-256 | 5E1A03BF215CDC0BE7A1D5CE0A93D6868ECFD89BBAA59FC6C3FE33FD0641A5B3 |
SSDEEP | 49152:TP4xjETCx+Ml/PDzuFosZyMAVzs8hPTYvE973CKIMVVZ2WYFwOh9PhBeuwn3nBcx:TMjEElSyNtVQQ3dr/5Aajmd |
TLSH | T101466E47F2D218ACC0D6D434539BAAB2A520787C41743A7A7685CB311F37FF09B6AB52 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.cf.gz |
FileSize | 114490 |
MD5 | A38EB3E6B9B66F70805442FD99021ABC |
SHA-1 | 175C32E31F53AD71EA4C4CC58A8A3E41CD8552D5 |
SHA-256 | 6BF576498591D22F498567C7D59D07416CA92C5366EF2E085D56DF3A78AB6DC9 |
SSDEEP | 3072:cHYgzQ3dPW1Suu/2M4Dv6TWMXL5FfQIf901GxDgx1QrfIXx09AEy60GO:0zQNiDu/2M4DvAd7QRx15fp |
TLSH | T182B3127D04B95D1EFD87CAC9C086E647AA1234C9C7CDA466E4D142CF88076329EA58FE |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/copyright |
FileSize | 7971 |
MD5 | 68D1E206102D7159F1073BDBCE5A9DB9 |
SHA-1 | 35928699B5928C497D60DD90F05237AEC612E599 |
SHA-256 | 82A7D998755F13F088002CD23D8C400023C0BFC572F360C9C2DBE24463D8D737 |
SSDEEP | 192:HBuMzs+EaI0mMkMV5y8Ezs3LshgXTxs2F3n:HBuMzs+E1bOV5Czs3LshYTxs2F3 |
TLSH | T1ECF109483140C7B7A1C033C26C966ED5E32BE7E772B94E81345DC25E5B1692E12FA8F4 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-omp |
FileSize | 5403208 |
MD5 | 5B94774E1F4C9E05481685207DCF93A2 |
SHA-1 | 787256ED4CE075F86A51640B1DC3AE20AF5348BB |
SHA-256 | B4828849D475CAC7A0D1C093B09F2BBAA790F3F8DF96503F8E750B3CCD85A274 |
SSDEEP | 49152:OP4jjETCx+Ml/PDzuFosZyMAVzs8hPTYvE973CKIMVVZ2WYFwOh9PhBeuwn3nBcx:OWjEElSyNtVQQ3dr/5Aajmd |
TLSH | T14F466E47F2D218ACC0D6D434539BAAB2A520787C41743A7A7685CB311F37FF09B6AB52 |