Result for DF91BA401CDFC06B018DB04296BF85533509CFE2

Query result

Key Value
FileName./usr/bin/topfd
FileSize1452440
MD57EEED22E883E4E626C1E7003252F4D71
SHA-1DF91BA401CDFC06B018DB04296BF85533509CFE2
SHA-2567BEE77CD26872E4F4F554E7E99641DD70F2FC21EA220A585E9BB3DF791ACAA48
SSDEEP12288:QNPD3dZ8lwa8/slcKVwC8KKjNeGFJs2wgP8Eb4agci1jzuAZt1u7+DfWnpz0DeXS:QNPDMLmC8KGF1Otu7afQpADesdZwf
TLSHT1FA653B0EF88F7C17EB87F9FC7B4B6797282718C2B948A0702446924CD6CB6E9D632551
hashlookup:parent-total1
hashlookup:trust55

Network graph view

Parents (Total: 1)

The searched file hash is included in 1 parent files which include package known and seen by metalookup. A sample is included below:

Key Value
FileSize2225328
MD5E0FEEB061B3FABF361A08587381412C9
PackageDescriptionTop-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples.
PackageMaintainerThe Debichem Group <debichem-devel@lists.alioth.debian.org>
PackageNametoppic
PackageSectionscience
PackageVersion1.3.0+dfsg1-4+b1
SHA-12C084A97BD486B04F2F0DE5C13DF6D1FB19750AC
SHA-25609FF115D70BA9F44474F34358D349238C83EFF73C7BD287DC62C91A8FF44DDB0