Key | Value |
---|---|
FileSize | 394436 |
MD5 | F349E2E455B13C483838508FDF54DD4F |
PackageDescription | QIIME 2 plugin to work with adapters in sequence data QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features: * Integrated and automatic tracking of data provenance * Semantic type system * Plugin system for extending microbiome analysis functionality * Support for multiple types of user interfaces (e.g. API, command line, graphical) . QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline. . QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed. . This package wraps the dada2 R package in BioConductor for modeling and correcting Illumina-sequenced amplicon errors. This was shown to improve the sensitivity of diversity analyses. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | q2-dada2 |
PackageSection | science |
PackageVersion | 2021.8.0-1 |
SHA-1 | C99F137161CBDF036EE2C3DA92806147651EAECF |
SHA-256 | 51EC7C7644672D2C3E6C6A4B1188BADEF6E755A5B71E267105CABE1EF9B136E6 |
hashlookup:children-total | 82 |
hashlookup:trust | 50 |
The searched file hash includes 82 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-default.tsv |
FileSize | 3577 |
MD5 | 935E9DAB387C83D9775020ED72B5FC8B |
SHA-1 | 007716307501BADF6244D6011AD71A4B1799FA70 |
SHA-256 | 836466AA2D585147C74781BFCA9303DE8409364AF506FB872F504CAA92EC80BB |
SSDEEP | 48:O2+/32rM6TBxCWAkGuhL2aeBYEyUG8+VMl3r3J2ZGd:8/GwsBx1AkGui2UleMlsZGd |
TLSH | T1A9710B3C7C511280D5A54C7B4BBEE56C2EADB1AB3945183D0843B1494D319EBEB6FC1E |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_36_L001_R1_001.fastq.gz |
FileSize | 10389 |
MD5 | 3801B073E38C168222A7A259C929B97C |
SHA-1 | 033531A229CFB536CE53814CB4C4BD460BEB677A |
SHA-256 | 431A4F6ACD0069E4C96352902AFA3658B688A3359A614871A9E1CA56CEC8457E |
SSDEEP | 192:aUJn2O/AgBMGlKO9hkRm8EiQ6o2W5IwrPtALxpvL4goUjcQ6QAlJ37tSLy4UIyJH:aUJn2WmGgcZiVWC6P+xpvhhjruR7t+sr |
TLSH | T1F022C0C1881582D0303374667AA68CC0FA4E5DF08428E144A8FF7046AEFE6646EADB1E |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L1_S257_11_L001_R1_001.fastq.gz |
FileSize | 8716 |
MD5 | F4D73253B4263207E2ECAB94884AC26F |
SHA-1 | 03B962E426559CACB1FDD6FAAF44427062991BAA |
SHA-256 | B4B01F78F27E31168A3A1F7C5A7A96BCC037E91E59221B1DDA232D4ECA73B88F |
SSDEEP | 192:oHr2bfPnKoCqLWPfRMor++9ckQ3m25ucA/CUQzEIpz:nbHKojLWXWW9j6m25MFQdz |
TLSH | T1C0029F51DCD7D5122834EBAE7342A5A21E2D460D8C7C4ECB51E44AE6EE52F72C3C82F9 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/underscore-samples-stats.tsv |
FileSize | 617 |
MD5 | CA473E4EF492F536D6AE04477E1FB76B |
SHA-1 | 09AC4FC339C0FC66438F0CC9E1C886DE8967BF54 |
SHA-256 | 6D4BFC705D39F0B55B4F8F023F56C752D63FCC9FCD285A211CB62C9D32146856 |
SSDEEP | 12:Y96qM/9e5q8UAU2Z4GH1NbEHdfQA/hdAK7QsTUj6x2KnB9p:r/9eRUAUeVNbs9ppdbx2KnPp |
TLSH | T190F0C8E81EE521806445D6D5D8F9F521A96EC3F34F4404AA24F4E77F39384835B90857 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/__init__.py |
FileSize | 707 |
MD5 | A0FE77710EE80F8AD3A9E80EC2F21183 |
SHA-1 | 0BE9F281ACAA80F77F4221FA463A63A5B2051FCD |
SHA-256 | 15F3FE5FE7297151B1E5A269D75599C7899C0B0E6F4EA3803484CFF90BBCF585 |
SSDEEP | 12:M83oZW+hxCNrUp2XiQQyNCwU+cYs46wivRxX6t5w:M83o8+hxgBi+CwChbwivnz |
TLSH | T16E01FC352C9DB3764D96CE47E98A449FEF360326ABA12E01317C409DFB0DD18985C556 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/citations.bib |
FileSize | 397 |
MD5 | C94F1B193D079E217BA2E20F49871DBB |
SHA-1 | 1864B0A00FC208D32B46D42969FEB4D337329C2E |
SHA-256 | F1E37EE83C316A2DAFC51DEC845CCC08AE1BEAF44FA0A7766206D2659D3770BE |
SSDEEP | 6:Ur6je62QxeKpyaSvFmBkeTLAOMQWEO1KIcJiDeI0FuarVlHghYf:pe62QLplSzsACWH1KjCXqu8f |
TLSH | T1F1E0F10BBB6247D1B71E0BFD0EA4114198F380DB290679800560A384370D2B1357DF22 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/single_feature.tsv |
FileSize | 216 |
MD5 | ADC4193D29C68F2693BD180F6EC5B9D8 |
SHA-1 | 19492B8944D84BDCE6726F3B65F717E1036BE580 |
SHA-256 | 97DB1546AE525FE9E6224BFAAD5496DAD33D65DC2DFF4B57EA58E720A353BC6F |
SSDEEP | 6:TfIP3p2XMCueIjjsoWLkfp6FaUcFiJu0f/R5OW0nQF:TfIP52pIjHBceKf/R5OO |
TLSH | T193D012D42C67A240F4D40CB34C7D6620186CF197D548121E4D5B311A8D7AF47D3AB97D |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/_stats.py |
FileSize | 714 |
MD5 | AD6C79A238051899E299B6ECE00517D8 |
SHA-1 | 1DCDD43CD4443AFCD6D730E20D20096D09DC89FC |
SHA-256 | B197242875E90E446A2D963E0ECA015ECBDA234D2F68394158F5B1779077FEFF |
SSDEEP | 12:M83oZW+hxCNrU1W8BIKWErFUb/NMg9n1fXPg4udQY0:M83o8+hxgkAKDRA/NZHQ4uI |
TLSH | T173014C507CA93731CF9ACD63ABCA405ECF22032B1BA62D55716C421CFF15E6464AC3D6 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L6_S20_20_L001_R1_001.fastq.gz |
FileSize | 9302 |
MD5 | 001040D0D292F5F7170F09C27B8C528F |
SHA-1 | 1ECD2C788D2287E8C1EF095C4361EE7508A33AC0 |
SHA-256 | 9EE5690DC257D8551FCBA5FCBC979513C8A6AFC0CCD24D982D71CF7F36514175 |
SSDEEP | 192:DnCn7HjKdJGnCEX323J85V6hl7oUV8tJHjlKJI:DCnKan7oovHxKi |
TLSH | T13B12B00DF165C517D1A2298C455F2FE9511C0ECE8B60696F7035B5AC388A532CDF8E4F |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_10_L001_R1_001.fastq.gz |
FileSize | 9614 |
MD5 | 28EF98E9F977782ADB19256812A42C43 |
SHA-1 | 2A313FF64B128B61B508A8DC6CF699013A3CF6AD |
SHA-256 | E72D36C65C833F86CB19446326B7306CA3349CE8545AA1C7A6BBE2B2759D4D36 |
SSDEEP | 192:hbxivm5GgFF8gkkIe2b16MpYIlFtAkTAXqSc6pk1X7MuGsjrQfR+9ouR9sJKLC6:2e5GgMljhln2yeqSc6pk1X4uGsHQZ++8 |
TLSH | T16012C064BEA743B76FED580C216BEA4F71D41C220F68DD71519FA5135D1AC22E03CB08 |