Key | Value |
---|---|
FileSize | 1094874 |
MD5 | 2D92F752C49EC1BA94FF1D9AB605093B |
PackageDescription | Ultrafast memory-efficient short read aligner This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the challenge for tools like Bowtie to give a chromosomal location to the short stretches of DNA sequenced per run. . Bowtie aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end). |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | bowtie |
PackageSection | science |
PackageVersion | 1.1.2-6 |
SHA-1 | C2A1BB68C6A5B65B22B271F13E55A840C40F6F59 |
SHA-256 | 4CC3DBA52D97F8AFB9F9227179E282DAF9BCDA67E9DBF2B386FE39CBAF3F1DE2 |
hashlookup:children-total | 36 |
hashlookup:trust | 50 |
The searched file hash includes 36 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/tests/example6.out |
FileSize | 46 |
MD5 | 6FAB1915585C78078C2B167A5E4BC975 |
SHA-1 | 08275D4BA9600EF76116744D4CDF1B9C3ACE0314 |
SHA-256 | A9526873BE16F5C6B747A241524876C8EED5B08C76ABE25840443AE4A6AF2014 |
SHA-512 | FACE1B21F228B5A8CD2DE2DFC0249BCF9E984A98DBC5F7B011A6B60F99541D1838E0F667AA7A9499DBC507E03D8447B844C69C171F69124BADFA82B28A4EE362 |
SSDEEP | 3:kYzQeeymzLjQAn:geeymnsAn |
TLSH | |
insert-timestamp | 1721655461.7841887 |
mimetype | text/plain |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/README.Debian.gz |
FileSize | 1872 |
MD5 | 85D0383C850BF9B59A02639E13964B42 |
SHA-1 | 0BBD5EAEF09AB9D3D3A4CFA1AB44E295270CEA80 |
SHA-256 | 9A38440B6030E8B27D80A73ADCCD34356D523F62A4596B0856E95B1B0FBB77A5 |
SHA-512 | 02AE6900437166F778592EB8B1B0AFB1ED9C0C553271D543997AFEAF454504AC514B56666C1A230C273A5C480B106E6EB45192028D0C9DEF2C3320E01CAA0824 |
SSDEEP | 48:XzC23Gpyjo+XR5qDc3HwafQoRyBFHFzlsDlqUFST1d:DT5RU0RPEBbzdUFcd |
TLSH | T14E311B067F95B19C8730349B641DAB5F8B9F35984720EF8FD65419D36E68802D0E2121 |
insert-timestamp | 1721655461.694273 |
mimetype | application/gzip |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/style.css |
FileSize | 4182 |
MD5 | 9AA46EEF370B54589029BC1CFC75DE73 |
SHA-1 | 1472192BBE555B6E38562A39B3BE94BA965FF57E |
SHA-256 | 00F99B9BA569F2C427695B3E12FE3E71D656A7026D609E2C2845AEE187427B90 |
SHA-512 | C2665904AF63AEFB9461F8620C7D28A001032D2C8F9D5ABAEC9C59913F2DE8CE78BD0E0F8B64C64DAD010DBA031032E653897B640F2727B2704F4F09225894B1 |
SSDEEP | 96:pTJaji7K+MPiJoqFibZwK4Qjpwns8JMFfcyXTKrAXnDm/kAosVylo:pFca0ZwK4QFAjMDX3XnD0kAoPo |
TLSH | T18B810F29AB81321FF09ED0F5FC67A353F30E8663750A9E79BA681874D04E8B105F568C |
insert-timestamp | 1721655461.7338123 |
mimetype | text/plain |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | ./usr/bin/bowtie-inspect-s |
FileSize | 291360 |
MD5 | 11DE752D2396ECEC8778725600737986 |
SHA-1 | 1E85CCEFE0A369B995875FB0942DFAF503106A2F |
SHA-256 | C1A7FDEE24F98675DFB300035585B512FCB8334B04189ECCE45C255A59360D67 |
SSDEEP | 6144:9PURBHzG7RDNp2m5d73RW9HhMzeqHAZulMGyyCZz7n554YpIpqwbEiLWpllZqLb2:KRBHzG7RDNp2m5d73RW9HhMKqgZulMGe |
TLSH | T17C54D5A5AF0F7E53C959EFB2AC3996F1832D8D2326124376BD4D50245B0BAC10F4E6C6 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/tests/example4.out |
FileSize | 53 |
MD5 | 29169D74A377CC0326B266CB28836B7A |
SHA-1 | 1F207EA5EA24D6FAC0E7B0B70A98E7F99825F36F |
SHA-256 | 07503216899B0E9F520C1780671AC91D27B3915205BE84211643175C2DEA49A9 |
SHA-512 | 2F3390BF7B67F5FF42BA90E871B103A236E6813144E815073B15CC232AE8560F739D2FAB38E23CEDEDD13A930F564BFD6ACEA987B5672BC6937DDCB1A4848A31 |
SSDEEP | 3:kYzQeeymzLWdMsMUWOGvn:geeymnatMUL4n |
TLSH | T13B9002B8E90965E01419EA51090804E07D774121434426432A1A9D57899EB601055805 |
insert-timestamp | 1721655461.8153737 |
mimetype | text/plain |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | ./usr/bin/bowtie-align-l |
FileSize | 734032 |
MD5 | 793D03D93739191B71E71CA6E6734EEB |
SHA-1 | 299DE995A5153B65AE428D3236E4B0C8185AA264 |
SHA-256 | E015CDA2B67D9BB5D875CC762C236712A37DC3DFE5B90579AB4B2F4D8D6151E1 |
SSDEEP | 12288:2JYGl21AUSvowtBwgPyfhB93U2tPlxjh8L+Np60g:2eGlvUCowPSnhTJlxjSLypg |
TLSH | T1A1F47E4B6B891E53DCF98F718C3A8273523C5CA327144626BEAC5A0C6F6B7DB0F81945 |
Key | Value |
---|---|
FileName | ./usr/bin/bowtie-build-l |
FileSize | 337136 |
MD5 | 245581757942ECF89E3CDEE340D89781 |
SHA-1 | 45BD157C5D50EB01F4A183781CD429D5EFDE96A8 |
SHA-256 | BF48EBE8B38620D6CAA85F758D052F0A317E948C25D2B49D897079D522C1CC8D |
SSDEEP | 6144:6ulmfqpizHvCbGRyuxiH98XfkMB1tKecGb/dOKpSaKzEaQTpI:ozPhxUMfkMB1tKecGb/dOKpSr |
TLSH | T1D56439AABF4A3F57D6A89F7D0C39A373012C8C6756624B33BD5849046F07EC50F8A646 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/MANUAL.gz |
FileSize | 21636 |
MD5 | 409BB2D150CAB5D8710A4E80170C3917 |
SHA-1 | 464CE67C05E88E4959B24E28D0423B25BD96A6C0 |
SHA-256 | 0E9B43F8284273F4634B6DA0DCE4770EF723B5D461295086279FD62F73D8EC93 |
SHA-512 | A7DD7A251E4D832F753E8C9B5D2F9B7C9C1A4FB56FE8FEB5B29FEC2E907F8E96626B4DE4ECBCB4E49BA15D259330867545C1BF469D5C629866D925DB7708F8DD |
SSDEEP | 384:SzWX1ATeDafIK4mv8ed+2aTPzp6PfP7cahFvF5HlvW0MhCvphdfb9liYG94:SiX1Xi4mvr+Xp6P73TXlu0nfhlfP |
TLSH | T195A2D1FEE4A0F708790D90870B2A75982050D147833FE9FE0F606AB7A4597D910F9D5A |
insert-timestamp | 1721655461.676974 |
mimetype | application/gzip |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | ./usr/bin/bowtie-align-l-debug |
FileSize | 1487112 |
MD5 | CA180DE7A4F2CCB6FB32573BB4616A9B |
SHA-1 | 4A0874E6097370EDA6BEFF9139D6ADB98FA05534 |
SHA-256 | 2FE41D0D1643E69EE802C2110D90A0EFFE352E9B2E62492AC905C6B6E4A20558 |
SSDEEP | 24576:Wg9uT2zmrfMM720lc/4OhHy2dDVC9lGWZvItXQ5+iLihOUOaaKa8+Q+YijiJiKid:qT2yrfMM7zgbdDVC9lGWZvItXQ5+iLim |
TLSH | T12665C3AF1B462E13FE7B9F728E77D5B2060F0D7361501310BE891A4C964FAC92E87946 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/TUTORIAL.gz |
FileSize | 2576 |
MD5 | 73BC8133A81F864AAFB24E52CE9243E4 |
SHA-1 | 585AFA334E22B0F4E91049EDD520A2C54E029A3A |
SHA-256 | 2FBCB24FEB40ADC2ED090574B5EFE5AED0D40C1B8B8AE98013386AC1385487DD |
SHA-512 | 0F21141D21F1ACDE8E2CEDC0F620DAFD22B2678D28AE3499EAC8D26B6046637F3BA781B9D751750699696C49B15083AA12664A504491A5DF2A3C81A9E5814121 |
SSDEEP | 48:X+0neBD0hIpCPLja0WEF679IgBcrHrAe9QtPySU/jXks8UEYp4M6zVjX03/:Reah4N0SHBz2QtapLXkhM6zVoP |
TLSH | T17E514CD73B22930935AD89941A08F3315CB2701F9C00E9B5A69F362BF94834673E2A78 |
insert-timestamp | 1721655461.6577423 |
mimetype | application/gzip |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |