Key | Value |
---|---|
FileSize | 1306984 |
MD5 | FE7E6E9FE21AF906198DC67ED7C161B9 |
PackageDescription | Ultrafast memory-efficient short read aligner This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the challenge for tools like Bowtie to give a chromosomal location to the short stretches of DNA sequenced per run. . Bowtie aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end). |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | bowtie |
PackageSection | science |
PackageVersion | 1.1.2-6 |
SHA-1 | BEC08B32AA990C0453EDD5A3735D0A7B83DAD445 |
SHA-256 | E2EB3BDF375FB51631941BE41DECF72C8946DCF3ABB2EB6E468F0C4AEC350EC4 |
hashlookup:children-total | 36 |
hashlookup:trust | 50 |
The searched file hash includes 36 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/bin/bowtie-align-l-debug |
FileSize | 1454512 |
MD5 | D27D581C766B90BBD626D4AF619410EA |
SHA-1 | 080C17526EC94D6A21444068A6D9C29ABAE95649 |
SHA-256 | 69229AFABBF39B769C8A1CA04C4473601456DF9F577859355355B0FA854AC929 |
SSDEEP | 24576:HjrI+qFM+yfFaElfWiPfdFLNMeHAHk3VnlKVTG1NNdojRijwOiVdLeuTMpMEMK5c:DrI+cM+yfpPfdFZMeHAHk3VnlKVTG1NA |
TLSH | T11D65B672255CDAB2DA237C3B834DAE01B38338450B34E5C569851786DF6EA6A4FF5C8C |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/tests/example6.out |
FileSize | 46 |
MD5 | 6FAB1915585C78078C2B167A5E4BC975 |
SHA-1 | 08275D4BA9600EF76116744D4CDF1B9C3ACE0314 |
SHA-256 | A9526873BE16F5C6B747A241524876C8EED5B08C76ABE25840443AE4A6AF2014 |
SHA-512 | FACE1B21F228B5A8CD2DE2DFC0249BCF9E984A98DBC5F7B011A6B60F99541D1838E0F667AA7A9499DBC507E03D8447B844C69C171F69124BADFA82B28A4EE362 |
SSDEEP | 3:kYzQeeymzLjQAn:geeymnsAn |
TLSH | |
insert-timestamp | 1721655461.7841887 |
mimetype | text/plain |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/README.Debian.gz |
FileSize | 1872 |
MD5 | 85D0383C850BF9B59A02639E13964B42 |
SHA-1 | 0BBD5EAEF09AB9D3D3A4CFA1AB44E295270CEA80 |
SHA-256 | 9A38440B6030E8B27D80A73ADCCD34356D523F62A4596B0856E95B1B0FBB77A5 |
SHA-512 | 02AE6900437166F778592EB8B1B0AFB1ED9C0C553271D543997AFEAF454504AC514B56666C1A230C273A5C480B106E6EB45192028D0C9DEF2C3320E01CAA0824 |
SSDEEP | 48:XzC23Gpyjo+XR5qDc3HwafQoRyBFHFzlsDlqUFST1d:DT5RU0RPEBbzdUFcd |
TLSH | T14E311B067F95B19C8730349B641DAB5F8B9F35984720EF8FD65419D36E68802D0E2121 |
insert-timestamp | 1721655461.694273 |
mimetype | application/gzip |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/style.css |
FileSize | 4182 |
MD5 | 9AA46EEF370B54589029BC1CFC75DE73 |
SHA-1 | 1472192BBE555B6E38562A39B3BE94BA965FF57E |
SHA-256 | 00F99B9BA569F2C427695B3E12FE3E71D656A7026D609E2C2845AEE187427B90 |
SHA-512 | C2665904AF63AEFB9461F8620C7D28A001032D2C8F9D5ABAEC9C59913F2DE8CE78BD0E0F8B64C64DAD010DBA031032E653897B640F2727B2704F4F09225894B1 |
SSDEEP | 96:pTJaji7K+MPiJoqFibZwK4Qjpwns8JMFfcyXTKrAXnDm/kAosVylo:pFca0ZwK4QFAjMDX3XnD0kAoPo |
TLSH | T18B810F29AB81321FF09ED0F5FC67A353F30E8663750A9E79BA681874D04E8B105F568C |
insert-timestamp | 1721655461.7338123 |
mimetype | text/plain |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/tests/example4.out |
FileSize | 53 |
MD5 | 29169D74A377CC0326B266CB28836B7A |
SHA-1 | 1F207EA5EA24D6FAC0E7B0B70A98E7F99825F36F |
SHA-256 | 07503216899B0E9F520C1780671AC91D27B3915205BE84211643175C2DEA49A9 |
SHA-512 | 2F3390BF7B67F5FF42BA90E871B103A236E6813144E815073B15CC232AE8560F739D2FAB38E23CEDEDD13A930F564BFD6ACEA987B5672BC6937DDCB1A4848A31 |
SSDEEP | 3:kYzQeeymzLWdMsMUWOGvn:geeymnatMUL4n |
TLSH | T13B9002B8E90965E01419EA51090804E07D774121434426432A1A9D57899EB601055805 |
insert-timestamp | 1721655461.8153737 |
mimetype | text/plain |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/bowtie-build.1.gz |
FileSize | 1206 |
MD5 | 40F8C4E78216B24A70FADA5F67005CD9 |
SHA-1 | 2163F3195540F66D1FF5DE021BDB77FC7F3D5554 |
SHA-256 | 2641DBAF2F5E51B202DDA8B32AE6212ECCDCD06048CC0A1FC2B3934FEFBF3509 |
SSDEEP | 24:XRY61xr0Z3liR6aC037zKdgqvaa4JmP/kXyN8dL07opa4658Uq3aGmm:Xj1xrI32HFSPPCmXDN8A4v73aGmm |
TLSH | T10421B78AD459EF2F57282D9D039E78E45E7648D9F4C4F23676A21204D54E2444E0606D |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/MANUAL.gz |
FileSize | 21636 |
MD5 | 409BB2D150CAB5D8710A4E80170C3917 |
SHA-1 | 464CE67C05E88E4959B24E28D0423B25BD96A6C0 |
SHA-256 | 0E9B43F8284273F4634B6DA0DCE4770EF723B5D461295086279FD62F73D8EC93 |
SHA-512 | A7DD7A251E4D832F753E8C9B5D2F9B7C9C1A4FB56FE8FEB5B29FEC2E907F8E96626B4DE4ECBCB4E49BA15D259330867545C1BF469D5C629866D925DB7708F8DD |
SSDEEP | 384:SzWX1ATeDafIK4mv8ed+2aTPzp6PfP7cahFvF5HlvW0MhCvphdfb9liYG94:SiX1Xi4mvr+Xp6P73TXlu0nfhlfP |
TLSH | T195A2D1FEE4A0F708790D90870B2A75982050D147833FE9FE0F606AB7A4597D910F9D5A |
insert-timestamp | 1721655461.676974 |
mimetype | application/gzip |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/TUTORIAL.gz |
FileSize | 2576 |
MD5 | 73BC8133A81F864AAFB24E52CE9243E4 |
SHA-1 | 585AFA334E22B0F4E91049EDD520A2C54E029A3A |
SHA-256 | 2FBCB24FEB40ADC2ED090574B5EFE5AED0D40C1B8B8AE98013386AC1385487DD |
SHA-512 | 0F21141D21F1ACDE8E2CEDC0F620DAFD22B2678D28AE3499EAC8D26B6046637F3BA781B9D751750699696C49B15083AA12664A504491A5DF2A3C81A9E5814121 |
SSDEEP | 48:X+0neBD0hIpCPLja0WEF679IgBcrHrAe9QtPySU/jXks8UEYp4M6zVjX03/:Reah4N0SHBz2QtapLXkhM6zVoP |
TLSH | T17E514CD73B22930935AD89941A08F3315CB2701F9C00E9B5A69F362BF94834673E2A78 |
insert-timestamp | 1721655461.6577423 |
mimetype | application/gzip |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | snap-hashlookup-import/usr/share/doc/bowtie/tests/example5.out.diff |
FileSize | 572 |
MD5 | EC79ED3F5678379FD5B2FE884E75A41F |
SHA-1 | 5BBA7BC6B749A5AFF2BFA83686BC08E56004E99D |
SHA-256 | 01068B695B400AD88D0EC148C38634D243F74BEB4CE31F95E3CAD20B51CFE2D2 |
SHA-512 | BCF62EFE5B2F81C6A9512AA26ACEA3D162B28842E85FAD9D07EA28A656915F0059D40D8C23C4550749AC6BA82FF71BA2D3DDF08D6F0DC9E310EAB3D6B0E6ADE7 |
SSDEEP | 12:9JcUs3s1H6i3JdkKeBtz3Bn3aRPDypGNJaRp0cZT:9Jwc1ZewRuYCRrZT |
TLSH | T11FF04CB8DB0D74E0A409D163001D1CF6BD73617543D41B832F198E33AEADB216206C24 |
insert-timestamp | 1721655461.842496 |
mimetype | text/x-diff |
source | snap:UXtarunTOMdX6KuVJXcYFrsrsojJ3LH0_3 |
Key | Value |
---|---|
FileName | ./usr/bin/bowtie-align-s |
FileSize | 733616 |
MD5 | B797B9B10869E0DB939EABE075FD6B49 |
SHA-1 | 5E3A4030DB1724508A880048761C2100E617ABEF |
SHA-256 | 1DE276F0C69465EC90053C7F483FD006F0EF9A05298D33EC905DA6D045C78679 |
SSDEEP | 12288:W0LEfIgmE4ri0bYvTizG3ZtqCaH770M7lvsk:W04fXp4rGvuzkZ6v0M7lkk |
TLSH | T1EBF42A12360CA6A7EF526C3F479DF9507393750507648596BA04030FEFEAA2A8F7AD4C |