| Key | Value |
|---|---|
| FileSize | 76468 |
| MD5 | C5476DC5227BD724B67050D074792746 |
| PackageDescription | profile hidden Markov models for protein sequence analysis (docs) HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries. . Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family. . This package contains documents and example files for the hmmer2 package. |
| PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
| PackageName | hmmer2-doc |
| PackageSection | doc |
| PackageVersion | 2.3.2+dfsg-5 |
| SHA-1 | BC45597B065D8EA5F05B373D5415EC4A538953E9 |
| SHA-256 | E48137C8CAC53CB1F36B4375363C06E71CC66DAC7F4EB18C5D109CE1B7F65558 |
| hashlookup:children-total | 13 |
| hashlookup:trust | 50 |
The searched file hash includes 13 children files known and seen by metalookup. A sample is included below:
| Key | Value |
|---|---|
| FileName | ./usr/share/EMBOSS/test/data/hmmnew/Artemia.fa |
| FileSize | 1489 |
| MD5 | F336678977451D5C30530BFAE1EF46B8 |
| RDS:package_id | 182052 |
| SHA-1 | 56539F1F150B2D4C127AF15076CA54C81DB46D3A |
| SHA-256 | 97223FB1E39A12C712773E69FEAB56D6B161E969C2A661598E49516B10B0E54A |
| SSDEEP | 24:BgxwgCn38aOwwUUZtfbkBxhGCoBZVhpiUjjZrYfOVP715Esv1UMmLiPZsZO61aPC:5ITfbYhGdBZV6UfxYfOh9mMmLiBsZj1R |
| TLSH | T19531B7E783D5330655599B522C2EE4440D989AD3A630D17F66474012E5E3F3325E3664 |
| insert-timestamp | 1679428038.884613 |
| source | RDS.db |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2/examples/tutorial/pkinase.sto.gz |
| FileSize | 18754 |
| MD5 | 831233E1DA387A75CB3B62FFEE940B5A |
| SHA-1 | 9A6D12105BC64CA96A57D7AD44FAF2EC91327C1E |
| SHA-256 | C121ECDFBFCEC2F52EA71F9DF05D1E41FA78C9042B8752BA6AFF97945B9565F8 |
| SSDEEP | 384:ZMjmuYIPwr+AE5oGaQycvaJYf1A69xvaKIUb4cKab554/suQf5vyJrA:ZMiufe2aywi/Meb4HaX4RQRvN |
| TLSH | T1DC82CE2AD4172CACD4E1EF3889DA1844E22E2DF586BC33066985C92F9D431873EBDDD5 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2/examples/tutorial/globins630.fa.gz |
| FileSize | 23575 |
| MD5 | F3D1E8B3C72B42C49BA31DA6FC5A45DE |
| SHA-1 | 5E9F5ED8A04BA56039F9E4CF78240FD3C2F34BB2 |
| SHA-256 | 2A1553B1F4B6D3A7E87CF0A9753A85A20DB8E849880409018C58ADE04D00C7E1 |
| SSDEEP | 384:yIwy0R1+BoxP+O8JZRye538j1Jnk+/FNQwVO3n8EIBYK6CvLhgdEDzD3OnkH:0b+BoxWxDd5IQt+aCz66zjq2 |
| TLSH | T11BB2E16608FE0661A489A713A8D8C8B758520F6DAC8F13EAD77123D9433BED899407CC |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2/examples/tutorial/rrm.sto.gz |
| FileSize | 5831 |
| MD5 | C5BFBF36C579944AC22923802FD36381 |
| SHA-1 | D2B4BC2DE18222D3B6C25C93E89918EEB6EE27E2 |
| SHA-256 | 7DD595B06D9EBD7E3B4EEE4E49B630F05F18BA34AF8B8668BAC873B46C7B7F38 |
| SSDEEP | 96:aYnEJQvW++vk1vSR0YR4htFFd9NyRzKk4qx1y2EkMkLL2qafFWImASDUE46cNuMt:aYEJQ+3vkoRWtF3y8qx1FEBXvtE46c4Q |
| TLSH | T175C18D597F58F7F2E562ED58A44435C79D223A710854EDCE588BB92D0436210022D793 |
| Key | Value |
|---|---|
| FileName | ./usr/share/EMBOSS/test/data/hmmnew/amino.null |
| FileSize | 418 |
| MD5 | C2FE88986943ADF4097FD63A21ADE4AA |
| RDS:package_id | 182052 |
| SHA-1 | 335B78B2EBA4F8F245607085D6C2286660C83489 |
| SHA-256 | 10399C0F00E9BBFAB2531F8C5F7A98E9DC0F28CD4D1F2F53855FE5875668005A |
| SSDEEP | 12:46DoEARk9KZWY4Kl1q7COmR195NQXy9xrMFgnkIo/:xxEBl1quhQArMCro/ |
| TLSH | T1B6E061D87B07279AD34C4A370B1B24F369840AAB27D939550C72D11DE31056437F5DD0 |
| insert-timestamp | 1679428038.8574262 |
| source | RDS.db |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2/examples/tutorial/fn3.sto.gz |
| FileSize | 11077 |
| MD5 | 26FC69A8EBE1D7BC63993BAEA047EE92 |
| SHA-1 | 9D0F80C5D28936CEEADA535795BB3F358783DEBD |
| SHA-256 | 3E4A4EF12F22F746BDE3AFEB0E9C68DF1FBFB0D880469F874F6A5CB8837251BA |
| SSDEEP | 192:gylgC9fsX2HWHXfblOuWkNE0eKcGteeGt4Qw2R+jkjQ74Yz01n:gylg2EcWHXJOLiE0ehGttGtvFjQ7C1n |
| TLSH | T1B332BFE0C2646FE3DA9CA75C586CC2CDBC3D27A1B674000499EDB5D756922F0B1A4BAC |
| Key | Value |
|---|---|
| FileName | ./usr/share/EMBOSS/test/data/hmmnew/nucleic.pri |
| FileSize | 745 |
| MD5 | B3953446B941D744EED4D208D2F2B5EF |
| RDS:package_id | 182052 |
| SHA-1 | E6979D0D3E0CEAA0CBCB080BBC12E59BA2EDA6E0 |
| SHA-256 | 4C24C84767A28DBD4B5CDC6C35735E9387C2BD98F8207BE899E35561849EE3FD |
| SSDEEP | 12:wpoEVuYKZWYwmJNqVPGeqKLZYkIT7hI98vaHngIOF6HcTnjGP1qKLiYKcKLHY5:wp0MvmsnkTnje7 |
| TLSH | T1A701262DFA18FBA89494D0B245BE20916C2E83FC9FCA26493C1EA679634359462953A4 |
| insert-timestamp | 1679428038.8660262 |
| source | RDS.db |
| Key | Value |
|---|---|
| FileName | ./usr/share/EMBOSS/test/data/hmmnew/nucleic.null |
| FileSize | 195 |
| MD5 | 2671C073962C5A820E3C3507B4241098 |
| RDS:package_id | 182052 |
| SHA-1 | D94BEDDAC739BC69AA65B63152F3C72A0874E79B |
| SHA-256 | BDBB36D9E7372469F4DE58083CB30C149E0737EDA42234AC7C1CC496C29B2AAC |
| SSDEEP | 6:SDDoELcbtFm3GUKFwgUaADEQxexQFGmIVGf3:KDoEA639KZWY4eWFGmIsf3 |
| TLSH | T160D0228D3A4E678EC14089210A8A01C38F04061902ED75A05C3A1808AB1094030C00E4 |
| insert-timestamp | 1679428038.8445075 |
| source | RDS.db |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2/examples/tutorial/globins50.msf.gz |
| FileSize | 4584 |
| MD5 | 338544F9F0910C7A559046E6EF7D3F35 |
| SHA-1 | BCABF913AD34D18C52511D17964A166168973C2C |
| SHA-256 | 0F1851738059814FB59E5B46E419A5AEE8CAF97D122A9C3282DA0FBDB67C60F1 |
| SSDEEP | 96:KCeKoTF+voAVvRwRIHHAdtLVLLLOwXwlBGD0ZBQ48gWiormJjGZW:K7KoTFsm5NL7XkBGDEJ8XdrmL |
| TLSH | T1ED917EC51B4BF241F4C85B14C20BA7EBB84953D12EC7CD0AB1F5A07748EB08C2A5B16D |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2/examples/tutorial/rrm.hmm.gz |
| FileSize | 5994 |
| MD5 | 1B436D0EDB4C264EC53995750D4C0283 |
| SHA-1 | 83DC3BF2FAEC0E14ACA11610F0CBE8DCBF21D79A |
| SHA-256 | 4BF6B66E76B233181C818CA4E4D631EFEAAE2C2DAB2D444690FDCA0B8E5E27CD |
| SSDEEP | 96:9ILOwmMOV7Qk3542Wc2KuwkxuV7eoihMBCbORk7yv93vmIiuQGkuFuHF2TCrJdfO:9ILOwuV7j3HWAMPowMBC3evpvmlu4Flw |
| TLSH | T110C18D4C93C9725DD3D9200692042E6193AD8D2EFE5257928CCFA7ECFCE1A10D277893 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/libhmmer2-dev/copyright |
| FileSize | 1366 |
| MD5 | 4F3EB721B376E434A9394193C5C02AAE |
| SHA-1 | A38091BAF79A98EF37DB9353584B0CAF47B533F8 |
| SHA-256 | D584B316D9512C978D14C0F34EA17DCAFCC6AE5FAE0149880A9164C860C8D038 |
| SSDEEP | 24:g0tg7Rg5+rZ1zDhtSOLx0Apk1Tlbci5OKVTbVMglH5yn5lpL9:IllG40EmZciXEg6n7Z9 |
| TLSH | T11621568D6544C37B5580254379465CDEE32AABEB30BCC1D1F00E839ADB16F7613B59E8 |
| Key | Value |
|---|---|
| FileName | ./usr/share/EMBOSS/test/data/hmmnew/amino.pri |
| FileSize | 3014 |
| MD5 | 12F2EDE62A307DA1212C1C862DF18CC6 |
| RDS:package_id | 182052 |
| SHA-1 | B6725560990E3204FFB1A9D9C5E861A798F7D38D |
| SHA-256 | BB9FD8C6AB3DC00A5CEBBED65F18F2C66E050FFCEED0262663B9BEDC0203C22D |
| SSDEEP | 48:SBOdFi+wsMbfVVc4AHYnZ0Yox0Opu5pRHJyzSzAmvfFvkm5GGcRL8O1N:SBOdFHws+Vy4AHYqOuapRHQMlvYGBsN |
| TLSH | T1055102F8C18461D0B494E924CF37BDB5908A75778EF3E488315EC05EE352AF69B14E84 |
| insert-timestamp | 1679428038.8934946 |
| source | RDS.db |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/hmmer2-doc/changelog.Debian.gz |
| FileSize | 1171 |
| MD5 | A02B414CBBE3E8AF7B03342C12052CA9 |
| SHA-1 | 238A6F34BFFAFC8728F18B7E0AABC0EA11B26B9E |
| SHA-256 | 620FC2453EA624696AC14CF470899D67ABEBE655FE036C2545708AD04A17304E |
| SSDEEP | 24:XtXQM0zdJcZTFjy6u80vGsFHlEMlgNzNa6deGhCwL0FCd:XtXQM0AZZO6YhHlFggieGhkCd |
| TLSH | T16D21D75E11E0420ADD2906E1F3B0A083F39EF7815056ABB4837BCA960AB10556ED4474 |