Result for A7A0C97C9DA6844F679895B2F8FB0F9E68231AC8

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Children (15)

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Key Value
FileSize1960572
MD53866433173D54D7D77BCE06348C929DD
PackageDescriptionTop-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples.
PackageMaintainerThe Debichem Group <debichem-devel@lists.alioth.debian.org>
PackageNametoppic
PackageSectionscience
PackageVersion1.3.0+dfsg1-4+b1
SHA-1A7A0C97C9DA6844F679895B2F8FB0F9E68231AC8
SHA-256ED5C301C151B3EEDCD3E4A8AE6B85F5061A8656708AAC3A3D8F10965A04CAB7B
hashlookup:children-total15
hashlookup:trust50

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Children (Total: 15)

The searched file hash includes 15 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/man/man1/topfd.1.gz
FileSize1782
MD50F1ACE6CE2995E873451A8C2898E075C
SHA-1F04FD48BC3BAA084611E86DC26AE4B48BE44F274
SHA-256B329D87F5B90C41E97EC98D417CDFF48C0F7CB3237F4F968B4396B3D3220326C
SSDEEP48:X8EYTifWKUlTXI0B82L44MYsGM0I0Ta9Aul:sEYTi3Ulc0K2hsGMgTaey
TLSHT1CE314B0CDE196BA4CCF50D6B332051100693BF723285C136BE366B80498561242C8D67
Key Value
FileName./usr/bin/topdiff_gui
FileSize2210200
MD56894EC9908DEB234ED007BA92A5BAAF4
SHA-11553C60431BCBD575C30D29BCEE8EB2A3B9E2B51
SHA-256EC67C09CA2F9A0D6BC479E45A5F5D17606ABC3876C83C78BC2BD91F5E2DA5ED5
SSDEEP49152:uwBlXr9r+T5zDjUDn4bbcwjnmx82o1r13kKLpwuASXA+pJA0fxJRJCO/dAOOyxf3:HvYowgR
TLSHT193A5099AB035C9CBC4B0BE73F2672EB79223397579C9B518C8CDD72A48A3355411863B
Key Value
FileName./usr/bin/toppic
FileSize3246496
MD5BE25A81537630ACE444206EF24F3E1A7
SHA-1CD0AC1DAB945FC1EBE34C188EB0D51B9AC6A51CD
SHA-256533B67DCB9BE968F530BBFAC26FB2F92AF67580E109055AAB82FED81793AD952
SSDEEP49152:cTcfWJe5zoPdzxjxuIrzG7XjnZMlRJrl3Niuu590nnXA9eBwwWxvBhSWy/fON4u6:+Ckemra/gr
TLSHT172E5089AB435D9CBC4B0BF73F1662EB7D623383579C9B51888CDD72A58A33554008A3B
Key Value
FileName./usr/share/man/man1/topmg.1.gz
FileSize3535
MD547CEEA9F6884D8FCACB81BEE2B3A5B99
SHA-13E15EE2D09377935673E9F74002F8FCD0EDCC582
SHA-2565C3CCDF8A89CF090B8E3309981E2B687E2CCB5EBF4346DD2724CC2E8C0266FEE
SSDEEP96:cPBsgiFqqjLokIooEdVWGAPUJNi2q7OmgSeycmt:EUFZj/IAW93/tghmt
TLSHT121716EC29EC1A8E2D7AEE94136E2ADF7C5504743D14C7DE567B082912323BCA459F05C
Key Value
FileName./usr/bin/toppic_gui
FileSize3398048
MD5BB012CE303960CFBD574797D0957650D
SHA-123029851B6CC50C59E650FDA452DA0B1D9702A75
SHA-25640E67A6937A9C0C240F3C2E98802581E4F3B5BD926509855E5EFF534BE9BF417
SSDEEP49152:PqJpbX3ApBZHsEzzXjpNgEwrACjn97ZIru3eurLfi7VXAS4c4chpcrbF6LplxO0b:yz3Ap5nz
TLSHT1A7F5199AA035D5CAC4B0BF73F1672EB7D223383579C9B51888CDD72A5CA33558109A3B
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.gz
FileSize642
MD5F0B28350E1E2A694631799991576927A
SHA-100E8DFADFABD41BF89D5AB55A041C881CCE06D66
SHA-256564B1C505C6FEE8F67AE0B48AA02ED972884C31677511AD374AE0C308769CC30
SSDEEP12:XgxQwifeaD1jTjpo+Vo3KCDl0ZyuIQY1XBeXgVMleVFz4X6LS5n9eN:XgxEfea5jTVw3KCDiZ6TRsXGMM34Xv5U
TLSHT102F068E37158A0CC89ADC2F57ED4509D0F6EC37F1C44090351E5464A71B4C9A661CB53
Key Value
FileName./usr/share/doc/toppic/README.Debian
FileSize395
MD59F1BE0E5BC01366624E688E7A6289E9D
SHA-12A85C921E54A42617DD7AE8CEFBEFECEA0ECE908
SHA-25615B781A7178B651A4AE147E3BC4C42F56C13AF7D7E7EB12803043BDE448FCC2D
SSDEEP6:GLxN82GHe1RvA75fKSMlGde/Ap2dZII1Sx4cXUVEC8FQ6N48ZiaGpcEBNg7HIv:EN8wc5jMlGdfMPcSEA6+1BNkHS
TLSHT1C0E0F1F30393B7233CF14AA9510C31849F1B18D4613722B408544C16E207812B2826F3
Key Value
FileName./usr/bin/topmg
FileSize3307936
MD5E0B05A4186469E6D7DB4DF8725C3D0B4
SHA-16C03A5B20B90376B228C8FD872B00C49457CCC29
SHA-256620E452E9DC5A239D3C5178145AE6EF30DAD3F8D59EDE990666D35E5A7A5CB9F
SSDEEP49152:z1v8ZM8bJNWvrzVjQ8jwj0VQjnXs0mru34K/YquzcXASwEIHmp17jq4/QDbOQrlU:ZUZllI+b
TLSHT113E5089AB035D5CAC4B0BE73F1672EB7D223383579C9B528C8CDD72A58A33554118A3B
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.s390x.gz
FileSize220
MD5390882DBD28532815CCC6914EAC99D90
SHA-124728EB7341AB68D0CC50198FA0AA2A89C4B5BCD
SHA-25603DBAA1ED52635C8CC794BB09F9F53C5028EAF4ADC973E23E01368858CFF5C06
SSDEEP3:FttrWfYvm1lz1xtzP8254cUgzoZAUiJZ+sEnRejG+KbblSYUW00i1qkfhj/HvaXr:XtiwuDz1Epc5WVJeQPlWWxkfJ/SXtR
TLSHT1E3D0235637DAA539C1050D7024DC354F04DD1DCB212C5D05544055C3CD7E0CE7B16367
Key Value
FileName./usr/bin/topdiff
FileSize2128280
MD5DF4386550AED5A5EB756E6EB8E04E911
SHA-132E5CEB918607208348EBFDE8E640165E96B3BEC
SHA-256C14724C45B0DF45D72C58A1EB7EADB7E8D6674A1D13344CD30BB8B312050574F
SSDEEP49152:FH4+vSn5zujxVcwDlmWjn1E6yr/3bBIaCEoVXAK1lJxSeviFVx+G7OHRNf2aNC6I:N3OL
TLSHT1E4A5099AB035C9CAC4B0BE73F1672EB7922338757DD9B518C8CDD72A48A33554118A3B
Key Value
FileName./usr/share/man/man1/topdiff.1.gz
FileSize1427
MD58508CB11FB0062732D842992C0F5103F
SHA-1BDE443625DCA168A2E7B457750FF4A3B42BA6CB5
SHA-2564451147E24F8EB7B0C1796C7D247615230DB170690A00B5E9D89099FB0896A9E
SSDEEP24:XDTVR9+7cKMqh7f4W6vUqXBZz8zqz1RUWBoyg5mnfw9Qnt/9RqJEvlwCEIs9R:XXKjhz4/XBZzj1ewo6ptSJEvyF9R
TLSHT1FB21C93C294C4A39CFDFE655292101AD9611A40492A1366EB509C5F0CF663BCA679573
Key Value
FileName./usr/share/doc/toppic/copyright
FileSize11547
MD544023D008A494F53E0A77BF27858AD33
SHA-104B3862797896C9D46DEC86867C000B36D5CEB17
SHA-2566A4EF227AE9B870F453F68F6BCCE2490EBC0969509B74B3E63E4F999AD8FDFF9
SSDEEP192:3mD8TPzHbvt6DeOXQH+TQHanHmTQrs6r1P3H3JajmbM2IOrXijoLt3i73hU9pjSK:3+8TP/vQDnXrT5kQrsINXJMmbfPrSjAz
TLSHT11832C71EBDC00B7309DC1AD2BA1D64C9B12AA41F7A668ACC645EF2150BB741DC0F6377
Key Value
FileName./usr/share/man/man1/toppic.1.gz
FileSize3706
MD551FBC0160B68799D7D6FA1F9C9BA1936
SHA-1A927CC04971DBEACBCE28ADBE20D876068D9198D
SHA-2566C5B9F79EB72EBC28F8317179A26C058F199DCF8FB90D53E78B12625714D2A6B
SSDEEP96:B6xe0FBZWYnxj6r1hIL0tVjjhhetKLb00leq:B6xBnZWYU1hKymULb00Mq
TLSHT153717EAD3A874C40D25FB2CAC0C7A912EB36C20FCDE8F8F5255E75353159B541205999
Key Value
FileName./usr/bin/topfd
FileSize1534360
MD5C27BD355C9A29ABB8B58BF445BBFD412
SHA-18EAEB3ED0AA343016DC14E1B80F3212DC448D608
SHA-256FDB82166472F23A816FAA82B8976D569B93D5185B422C34807B1E1838544D988
SSDEEP24576:SmgFQ0anCuectZnoq6v1PrAz2r+sFzH8qKB1e+gc+J71q3Gta1ldSjTFOaOCp2ok:SbKfCuectZnoqc1PrAz2r+sFzH8qKB13
TLSHT119652A96B039C8CAC871BFB3F1672EB79223387579C87518898DD76A4CE33554118A3B
Key Value
FileName./usr/bin/topmg_gui
FileSize3455392
MD544B77AA59C395E9B95A5CF047E7DA883
SHA-1EAF8B6264DDF4B9385EB30FAEDBC4779EAD0738D
SHA-256C95E4E60EDABBDB40AA3BA517FE802E6E82A801F7EFE70404D09D53D19EB7AE7
SSDEEP49152:1QzCBdkpFg+Ozwjb1HEKU34jnw7sTrz3k3HGc6h0XAY/cqSGph9laAioFOLHU22w:GlWKc
TLSHT16BF5189AB035D9CAC4B0BF73F1662EB7D223383579C9B518C8CDD72A58A33554118A3B





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