| Key | Value |
|---|---|
| FileSize | 37360 |
| MD5 | 64F037A9F2728DCEF09FEADC4511F203 |
| PackageDescription | map Pacific Biosciences reads to reference DNA sequences (Python2) pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. . pbalign is part of the SMRTAnalysis suite. This package provides the Python library backend. |
| PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| PackageName | python-pbalign |
| PackageSection | python |
| PackageVersion | 0.3.2-1 |
| SHA-1 | A04C705B6E7B33006562B8E08AFABB8B57A3329B |
| SHA-256 | 1001CCBC2430B02E4F7BC983E6EC939B13556C9A9862BA8131B43F78CEEC9EB8 |
| hashlookup:children-total | 32 |
| hashlookup:trust | 50 |
The searched file hash includes 32 children files known and seen by metalookup. A sample is included below:
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/alignservice/bowtie.py |
| FileSize | 10869 |
| MD5 | 8921166CAB55FDAF843C508D641D1985 |
| RDS:package_id | 184818 |
| SHA-1 | 00A55ECBDAF006C2B88841105EA7AC1B36D1016F |
| SHA-256 | 97ECFE51CF281011F3686D50DEB1C9D50FD7BFA2BCA9C7D7A1920FB055B601A4 |
| SSDEEP | 96:2g9rYJ2rYJM4tDFAt3S/pisCtya6/1SkmMJxkuFwyje1lC4J6vHE6hYY:X9rs2rsfDFw3kAsAF6dSkfCdH1l5J6vd |
| TLSH | T1AE22841BCA0A1BA19BC369A117D2E6416134A6271C777430389C92EC3F41829F2F72F6 |
| insert-timestamp | 1648769986.4174492 |
| source | RDS_2022.03.1_legacy.db |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/tools/extractUnmappedSubreads.py |
| FileSize | 7327 |
| MD5 | D3F516BF23CC1F0915CC4704465D1D20 |
| SHA-1 | 0BCDEE61CA74EE1E693A675865D0049B85DF244E |
| SHA-256 | FA5C2BFB1FCD1ABCC9B572FA5C8A89F66E4FF8A19D824BE8CE2CBACB2B9E92FE |
| SSDEEP | 96:q8+dSKvbV1wUyZ9j92HTsCsf58sc9ozfXn0l8gCSJA:q7sCV1IgsCsusB0l77JA |
| TLSH | T16FE14543C5B96F5D925706BC024F75837B257A2F0E0C64B0BBBC93282F5927991A0EBC |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/tools/__init__.py |
| FileSize | 1953 |
| MD5 | C499C2A0BBB0204281C6D74A2C63B953 |
| RDS:package_id | 184818 |
| SHA-1 | 12C520B7BF0EBF322D58D0E7CACED0D8909891AF |
| SHA-256 | C206FFCCFD8D6D995A53246BAC3AAD349020667F1F2C4CFCD01E9D6880EE89F9 |
| SSDEEP | 48:2NO9rYJ2rYJ9ex6rtHjO4sMw5t32sWEtV1GtLiHeGAS:2g9rYJ2rYJM4tDFAt3S/pixL |
| TLSH | T15E41A787528017B247E2479162EAFFC0B18A803D3F23BE0518ACF3845B6B52EE577595 |
| insert-timestamp | 1648769986.3858578 |
| source | RDS_2022.03.1_legacy.db |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/bampostservice.py |
| FileSize | 5897 |
| MD5 | 749D14F92DAE870016218DA838155773 |
| SHA-1 | 1651348B0B39E3AA706DDE89EEC5433DE760CAF0 |
| SHA-256 | 6043E08D80E2DF7B5EB5EBAC47C68D0149E1669E733D96D601E42170222C2298 |
| SSDEEP | 96:2g9rYJ2rYJM4tDFAt3S/pinzWbm0iAsvS0mG/FbkdqFq+QyN:X9rs2rsfDFw3kAzWS0xszFo4FzjN |
| TLSH | T19FC1512AA41449A39743019211A6A9D1F35F903B2F17D73834FCE1006F59F2DA1FBEEA |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/utils/progutil.py |
| FileSize | 3113 |
| MD5 | 647DD2409C38EE72D95E8A906427B89A |
| SHA-1 | 1BB323F0B3493C6AA3BDD539807D02C9899BA188 |
| SHA-256 | 9AA673D93975CBBF5BAD81D89D9753AFF65483754E2142F5CDD70563BBB64C51 |
| SSDEEP | 96:2g9rYJ2rYJM4tDFAt3S/pi52bHoxmj1ZTGtyHjN:X9rs2rsfDFw3kA5iokZTGtyDN |
| TLSH | T19E51A587C6050B725393237621ABBEC47328842E1E23BD25BC9CA5057F2792DE47A655 |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/pbalignrunner.py |
| FileSize | 13116 |
| MD5 | 86590F594FDF47A7E112964F52E10BC3 |
| SHA-1 | 1C281F2195469EEA22B9B1A35A7D39801F7E8E3C |
| SHA-256 | C2A1DDA6E23737FC9D1BB5200B6B1A8D088D1AAA5D04C5DEA8980A94630CCCB7 |
| SSDEEP | 384:Nrs2rsfkkguvdFs/wCsEv0/F/4vfftFKX5rXeNYeY6fV:NxdkDvdFsDsnsu69 |
| TLSH | T1B742A80B998209B1C38768654AA3B4061E9550171DAB587139FC972C3FBAC6DB3F1FE8 |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/ccs.py |
| FileSize | 898 |
| MD5 | F8377DC73116D149B9A0A741B99B3D33 |
| SHA-1 | 3AAB136D755708443FC3D91560E4D6D82E1DBDE6 |
| SHA-256 | 74A9BCA47DF3513F8DE048BD87AAE952854896273704D685EFE29ACA501F100D |
| SSDEEP | 24:1qoweWHmo1BepeS0gFptFrGUVJwlJ+0x7Hpwv:1jweWHh1gTwUVJwlJ+i7HA |
| TLSH | T1A211CC057893A670D4C998BF6101B020E0E6E71B1ACA1910329ED3661FB26E5B36F70D |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/alignservice/align.py |
| FileSize | 9137 |
| MD5 | 5B8648D4460460E8A05019E429568FE0 |
| SHA-1 | 3AE19C849B9CB6D8E8E1233F88868D87D94DB385 |
| SHA-256 | 9A66BF706F54DB43089641306F77ACB58D77AB859ED379C2A3F06631B616E210 |
| SSDEEP | 192:X9rs2rsfDFw3kAj6Nn+u4rD39i+2S6uny6FFNANnGs:Nrs2rsfkkq8noNQSyc/Gf |
| TLSH | T12512864B4A450EF283D795B32653B002292AD51B1DBB242138FD975C3F62629F3F2EE5 |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/service.py |
| FileSize | 3147 |
| MD5 | 8AEC3525E3E5FBA7ABB7B9B0DF21BC4F |
| RDS:package_id | 184818 |
| SHA-1 | 3AEB651F4763E74DDFE84CC235BF3E2E12315DED |
| SHA-256 | FC1CB3F152C2B79D776244E8C3DDBDD57C30A0858E72C3BE6423732C12F093C4 |
| SSDEEP | 48:2NO9rYJ2rYJ9ex6rtHjO4sMw5t32sWEtV1GtLiHJMKxPOLp6SpLPeSphI:2g9rYJ2rYJM4tDFAt3S/pir6y |
| TLSH | T10A51A58BDA84CFA22382866925537EC0730E501F2E3B68127DFDA2086F66D1EC43D569 |
| insert-timestamp | 1648769986.4179726 |
| source | RDS_2022.03.1_legacy.db |
| Key | Value |
|---|---|
| FileName | ./usr/lib/python2.7/dist-packages/pbalign/utils/__init__.py |
| FileSize | 1906 |
| MD5 | C63465CE73F91B8D8EEB816C0D313232 |
| RDS:package_id | 184818 |
| SHA-1 | 4DDCD936A3E56EEE7A2D112BE84792DFA206F03C |
| SHA-256 | 96B74F95A7F65C37B48875807967A7A6A468F0D3670A511449DDEF91D3E78836 |
| SSDEEP | 48:2NO9rYJ2rYJ9ex6rtHjO4sMw5t32sWEtV1GtLiHoI:2g9rYJ2rYJM4tDFAt3S/pij |
| TLSH | T116419687024017B247E2578562EABFC4718A803D3F23BE0528ACB3809B6752EE537495 |
| insert-timestamp | 1648769986.3406723 |
| source | RDS_2022.03.1_legacy.db |