Result for 9E580AB0B227C2745ECD5D53CCA586A12563CDFB

Search result
Graph view
Children (243)

Query result

Key Value
FileSize984460
MD5A685D3BCCE25E1EFD6C97A7462964C14
PackageDescriptionintegrated RNA-Seq read analysis CRAC is a tool to analyze High Throughput Sequencing (HTS) data in comparison to a reference genome. It is intended for transcriptomic and genomic sequencing reads. More precisely, with transcriptomic reads as input, it predicts point mutations, indels, splice junction, and chimeric RNAs (ie, non colinear splice junctions). CRAC can also output positions and nature of sequence error that it detects in the reads. CRAC uses a genome index. This index must be computed before running the read analysis. For this sake, use the command "crac-index" on your genome files. You can then process the reads using the command crac. See the man page of CRAC (help file) by typing "man crac". CRAC requires large amount of main memory on your computer. For processing against the Human genome, say 50 million reads of 100 nucleotide each, CRAC requires about 40 gigabytes of main memory. Check whether the system of your computing server is equipped with sufficient amount of memory before launching an analysis.
PackageMaintainerUbuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageNamecrac
PackageSectionscience
PackageVersion2.5.2+dfsg-2
SHA-19E580AB0B227C2745ECD5D53CCA586A12563CDFB
SHA-2567CA8E754917AB5731A17DF2C247B03EF38DFEA9B6A78A38513E098ABBBBCA6C7
hashlookup:children-total243
hashlookup:trust50

Network graph view

Children (Total: 243)

The searched file hash includes 243 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-17749-genome.fa
FileSize1232
MD514C065ABD67D129666BBB81D80E8C9E2
SHA-10054DE3CB50B065A9DDC3C6B0EC8EFD7250E88B4
SHA-256E2DAEBAC134F280F9D111831F0F607A4E9E4B11999C5AF223DE532F311A67797
SSDEEP3:PxJ3rkQrfioiixvriTkHkikRkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk7:JJkivriTRRSXUmT4ckduzLJRcai5Ul
TLSHT173219EFAD7F059CDD352018B081C13E18CE4616F4A03A71129E4132D0D64861E48B445
Key Value
FileName./usr/share/doc/crac/examples/test_f/causes/genome.ssa
FileSize7371
MD5B4329AA686DCB3AAB33593F2B4264AD8
SHA-10093F72E88241911EB1B24D3655F3DF9CD6FA693
SHA-256E4A4428CD6546458F7B2B633C5790D3B7E15D4D10E758D5B2C226666CE3F998C
SSDEEP48:2n/J4hQyoBdln2Enjzj7qOXkrR8mTSffblL30wnYNVAeqaAC7jMjh:2Bb5Bd92ujzvqXrR8fRL3PuV0c7jMjh
TLSHT1A8E1B50F9BD54EC7D02E0DB5448B9B5C25ABDD354B120603DA387D2B6EB62B43B81E78
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-17175.sam
FileSize9922
MD5284DFCB5105E5CEA6547878B9EE23517
SHA-10148B48A5768FC641D76ADC4BF76E1B32256A8CF
SHA-25691BD1CCE69C02E13EF65911C416374EDD13DA2ECE8D7CAB9E7E553692F7C4F24
SSDEEP96:MU4lG0rq2F+xX2F+pRtOxG0rq2F+xX2F+pRtOX2F+xNfp2F+xfLM2F+xcXXhrX2R:MlG0rwteG0rwtujHhjjHhm
TLSHT1BE2246B81E91595724200BE7286F37CA1DC8C102B9493A92FF798F1D9D74653E07F8EA
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18793.should_get
FileSize383
MD589730026C64E5C73CCFCF7CCA9A7CFC4
SHA-102067B1AB1D583551E2B833CD65869D20BAB953E
SHA-256D9D5747898B30F68F060ACB543ADDBA8D40193AE4C38FFBF2729E26A4832CC76
SSDEEP6:Vw+tn2MnC+nn9BKw+tnIkgrikno2EGw+tnIvQ1o2w+HGVar3f/n:uGnPYgrHucWHZaLn
TLSHT190E092A5C859303181E8150EBE27C97AE5FDB52473C513605C10EAE9C14FD5D70A5CA0
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-16581.should_get
FileSize496
MD5CAB4B11B640543B55CD6EBB154765D03
SHA-1038498A319DCF5E4E01D7BC764EFEBACF2309946
SHA-256C171B25457528E95939377C84C607A115AA6CC70084DD698FBFA1E1FBC2B3CA3
SSDEEP12:uRnx4ghWGvhWGWHAAz6VYtCDoMGnXXhIfU8n3V:ubFXvXYLz6VYADSn+fXl
TLSHT169F059F1095B36300BF0210F7B27DAFBDAFC663433C416609C009B9D884EA14E0A66A0
Key Value
FileName./usr/share/doc/crac/examples/test_f/index_genomes.sh.log
FileSize39
MD5EBDAC7A9CDFA377E882E0AC605D32978
SHA-104D151A357CE3865AFEFC578935B04AF07EEA18C
SHA-256527DEC56412A9CC311696DCA3F5808F16670614CDA78A6AB895EEC5DAEC0DF1A
SSDEEP3:52213S4MqdWf2:KqdY2
TLSH
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-16581.sam
FileSize637
MD5C62321F0C89C20C39F1B9389BD63594C
SHA-10605D65CF232B5BF4C676D1B4FA9E1A0066E2241
SHA-256B8C2F76D839EBC9FE1904EFE03CE6934263CCC7414366516128EDB6C8D1C9E99
SSDEEP12:nC5YQV7OY/nx4uQvWXb/XZ383vzbLagaiYy16wjWPWIo08n3yLagaoMs8Y:SNOYZsCbFAbb3aiYy1bi4i3aR8
TLSHT1E1F07D780DBE54B896D2084E7B819E6DCE78101877816770CD29C75D08C89F5E0CB348
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-15639.sam
FileSize560
MD5EEB5A90BDB878188949353C7EA29DDC9
SHA-10644652F4818B8C7BDAD9F40DDBF851841AE89FD
SHA-2566E38952FB642515F965C8A409880D9D3F2DD5A7C052B23853344CEBE22931656
SSDEEP12:nC5YQV7OYqnPQNXjfnq2SQxqxDtiOZLavae+fUed7:SNOY5Rjfq1Q0xDTSae9eZ
TLSHT19EF0E1E22DBD54B871C60CE53A64124DBA3C19605FE616B08C05C303C7C4A85D1DF946
Key Value
FileName./usr/share/doc/crac/examples/test_f/cigar/consistency3.should_get
FileSize2808
MD560A0224B850B51CA86A9B6726DE6B239
SHA-106AB601A9E9DEC5B4183BCCBF91E05C1E878F5C2
SHA-2561B3D8C5DE2EA3CFC9EEA7078E9269B538565594A69E53A034847BF590191DA0E
SSDEEP48:0lN+zryxYx3xlN7BO7JRw0a0aSuJSL0nQ7uS:6N+a2txj7BO7QSIwuS
TLSHT1FD514C37A21A255EFAD2DD54F419E305EFF26468262BD78809C5EAC3480C84CA4DB0F9
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-case-sensitive.tap
FileSize502
MD5FDC68B5C1983F2C2F34FB9460188E2B6
SHA-106C513AFF8BD3F495468C2D44CEA4A610B2AF202
SHA-256AE78901D7D7237B13A961A7539F519C3C66C23F320EB2D83F7D4D7352D66D8E5
SSDEEP6:SbOM7qwwJF/rFtEWD9xM7qwwJF/rFsyVM7qwwJF/rFvPdaLxM7qw4oWJF/rFtEW+:WO5L/IS5L/X5L/RixPL/IHPL/kPL/Rk
TLSHT193F05EBF2BDC173307A52210B909308F3715EEB49F0069B9927CF0092205DE496A35D3





metalookup is a service from miwakeru.com