Result for 9CE598DE62952B947E4B033E6808B0D0E4E41E4A

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Graph view
Children (227)

Query result

Key Value
FileSize301344
MD56649BB4FAB0A5CFBF301A16E1FCB9348
PackageDescriptionintegrated RNA-Seq read analysis CRAC is a tool to analyze High Throughput Sequencing (HTS) data in comparison to a reference genome. It is intended for transcriptomic and genomic sequencing reads. More precisely, with transcriptomic reads as input, it predicts point mutations, indels, splice junction, and chimeric RNAs (ie, non colinear splice junctions). CRAC can also output positions and nature of sequence error that it detects in the reads. CRAC uses a genome index. This index must be computed before running the read analysis. For this sake, use the command "crac-index" on your genome files. You can then process the reads using the command crac. See the man page of CRAC (help file) by typing "man crac". CRAC requires large amount of main memory on your computer. For processing against the Human genome, say 50 million reads of 100 nucleotide each, CRAC requires about 40 gigabytes of main memory. Check whether the system of your computing server is equipped with sufficient amount of memory before launching an analysis.
PackageMaintainerUbuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageNamecrac
PackageSectionscience
PackageVersion2.5.0+dfsg-3
SHA-19CE598DE62952B947E4B033E6808B0D0E4E41E4A
SHA-256AE2CD2E0ACE1AA41CE8DDF3E118F7A9F3ECB9D6CC65A5FF5CB9158D771A2EAA1
hashlookup:children-total227
hashlookup:trust50

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Children (Total: 227)

The searched file hash includes 227 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-17749-genome.fa
FileSize1232
MD514C065ABD67D129666BBB81D80E8C9E2
SHA-10054DE3CB50B065A9DDC3C6B0EC8EFD7250E88B4
SHA-256E2DAEBAC134F280F9D111831F0F607A4E9E4B11999C5AF223DE532F311A67797
SSDEEP3:PxJ3rkQrfioiixvriTkHkikRkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk7:JJkivriTRRSXUmT4ckduzLJRcai5Ul
TLSHT173219EFAD7F059CDD352018B081C13E18CE4616F4A03A71129E4132D0D64861E48B445
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18793.should_get
FileSize383
MD589730026C64E5C73CCFCF7CCA9A7CFC4
SHA-102067B1AB1D583551E2B833CD65869D20BAB953E
SHA-256D9D5747898B30F68F060ACB543ADDBA8D40193AE4C38FFBF2729E26A4832CC76
SSDEEP6:Vw+tn2MnC+nn9BKw+tnIkgrikno2EGw+tnIvQ1o2w+HGVar3f/n:uGnPYgrHucWHZaLn
TLSHT190E092A5C859303181E8150EBE27C97AE5FDB52473C513605C10EAE9C14FD5D70A5CA0
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-16581.sam
FileSize637
MD541DC4A9A09DCB479274FA78141407859
SHA-102F3FF034EE509C0DC3695E87256F1D8F4A9B1DA
SHA-2560048684C65B7DA386172DE6940E4F3300FB9C0461E18DB026F310FDF8F7559AE
SSDEEP12:nC5YQVn/nx4uQvWXb/XZ383vzbLagaiYy16wjWPWIo08n3yLagaoMs8Y:SdZsCbFAbb3aiYy1bi4i3aR8
TLSHT119F07D780D7E54B8A6D2084E7B95AE6DC97C601877816770C919C79D08C89E4F0CB248
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-16581.should_get
FileSize496
MD5CAB4B11B640543B55CD6EBB154765D03
SHA-1038498A319DCF5E4E01D7BC764EFEBACF2309946
SHA-256C171B25457528E95939377C84C607A115AA6CC70084DD698FBFA1E1FBC2B3CA3
SSDEEP12:uRnx4ghWGvhWGWHAAz6VYtCDoMGnXXhIfU8n3V:ubFXvXYLz6VYADSn+fXl
TLSHT169F059F1095B36300BF0210F7B27DAFBDAFC663433C416609C009B9D884EA14E0A66A0
Key Value
FileName./usr/share/doc/crac/examples/test_f/index_genomes.sh.log
FileSize39
MD5EBDAC7A9CDFA377E882E0AC605D32978
SHA-104D151A357CE3865AFEFC578935B04AF07EEA18C
SHA-256527DEC56412A9CC311696DCA3F5808F16670614CDA78A6AB895EEC5DAEC0DF1A
SSDEEP3:52213S4MqdWf2:KqdY2
TLSH
Key Value
FileName./usr/share/doc/crac/examples/test_f/cigar/consistency3.should_get
FileSize2808
MD560A0224B850B51CA86A9B6726DE6B239
SHA-106AB601A9E9DEC5B4183BCCBF91E05C1E878F5C2
SHA-2561B3D8C5DE2EA3CFC9EEA7078E9269B538565594A69E53A034847BF590191DA0E
SSDEEP48:0lN+zryxYx3xlN7BO7JRw0a0aSuJSL0nQ7uS:6N+a2txj7BO7QSIwuS
TLSHT1FD514C37A21A255EFAD2DD54F419E305EFF26468262BD78809C5EAC3480C84CA4DB0F9
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-case-sensitive.tap
FileSize502
MD5FDC68B5C1983F2C2F34FB9460188E2B6
SHA-106C513AFF8BD3F495468C2D44CEA4A610B2AF202
SHA-256AE78901D7D7237B13A961A7539F519C3C66C23F320EB2D83F7D4D7352D66D8E5
SSDEEP6:SbOM7qwwJF/rFtEWD9xM7qwwJF/rFsyVM7qwwJF/rFvPdaLxM7qw4oWJF/rFtEW+:WO5L/IS5L/X5L/RixPL/IHPL/kPL/Rk
TLSHT193F05EBF2BDC173307A52210B909308F3715EEB49F0069B9927CF0092205DE496A35D3
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-15605.tap
FileSize54
MD541AD9AF1DEEE62CD5580A292BF220CF5
SHA-1076C651767C4B248E69D048B9EE962AF820C1ED1
SHA-256BE269293D5895D3A6F9713C13F4A90F55CE49A1974B3D93DC42F85BA9F6D7C84
SSDEEP3:SL2E4SGUTjL3OOMsFvn:SqTSGeL3OOTVn
TLSHT180900294AD759134031552621C1609555289455449C965606C4B7840360D08D3D18AF4
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18522.tap
FileSize103
MD57F5AAE2CF6DFE457783D0A1CC4C08DCB
SHA-10AAEE331292C7D77AAAA5D333716A5B4CA6A0BC4
SHA-256416F95BD90A9F7C0081B2D4F6823A127811459C69EF9C37E9D83EF84C1813E63
SSDEEP3:SL2E43eUF/LR/2PFMCWt2qTHo3IpFLhthBun:SqTJD/CmrHgIpFW
TLSHT17EB012D9F4DE8735027754742207745AB3C7E0B0C04F2255144DF5287A5F48009080BF
Key Value
FileName./usr/share/doc/crac/examples/test_f/causes/genome.ssa.gz
FileSize2288
MD5B7AAA46EB6D57B0F5E2312EC50727CFB
SHA-10BD6B0D7384E910F58C556BA37ADDFA10CCEB9D4
SHA-25649F66C12B3BDC4BEAE4F458E68B968C8E70B08E0464D8ECDF028F684C687C4B9
SSDEEP48:Xgwmxaz7a4vwl2s1PQsUbSe6uysKGWWW4+QEZHAqe9Sh+b+FrAP:wz4vDvGlPQxbN6uLKGW4+QE9GShZ1A
TLSHT196414D863EF4064601702D921322BE2D709EE72835F097618F6AC464D7FA491FD417D9





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