Result for 9A950731478318FAB1FBA597871060B793BD46BF

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Children (15)

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Key Value
FileSize1957224
MD557FD300CC192B9EEA01A347C3F1324C1
PackageDescriptionTop-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples.
PackageMaintainerThe Debichem Group <debichem-devel@lists.alioth.debian.org>
PackageNametoppic
PackageSectionscience
PackageVersion1.3.0+dfsg1-4+b1
SHA-19A950731478318FAB1FBA597871060B793BD46BF
SHA-256D1345A6B4304A8290556C7A24B8A76EA671985549583FBC03C2D1D99BAAC1336
hashlookup:children-total15
hashlookup:trust50

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Children (Total: 15)

The searched file hash includes 15 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/man/man1/topfd.1.gz
FileSize1782
MD50F1ACE6CE2995E873451A8C2898E075C
SHA-1F04FD48BC3BAA084611E86DC26AE4B48BE44F274
SHA-256B329D87F5B90C41E97EC98D417CDFF48C0F7CB3237F4F968B4396B3D3220326C
SSDEEP48:X8EYTifWKUlTXI0B82L44MYsGM0I0Ta9Aul:sEYTi3Ulc0K2hsGMgTaey
TLSHT1CE314B0CDE196BA4CCF50D6B332051100693BF723285C136BE366B80498561242C8D67
Key Value
FileName./usr/bin/topmg
FileSize2922184
MD5AC2B8E68E75AB4FF55E3445907D01669
SHA-17B542BE4B7337CAD5526674E0CC347AB5646AE61
SHA-256EC53C2F0B700F8EC0FD34AE69FFF5F26008C7F6D8F8FDF5F212DDA2DE7439087
SSDEEP24576:w4qNCn7lVMGc2RPMNB4O1orL0tHxYVkaa9eumoeT6JbTs6SeMKAgsJNiARPZN97M:w4qwB5FvDqaTpZKShPlHKyNG
TLSHT124D52C56F844DF92C9C07AB8F18F53AB721707BAD1E9600D8C2965187BD71DB0E3AB42
Key Value
FileName./usr/bin/toppic
FileSize2860744
MD523841EB85EB06EAC9532F15882A5762A
SHA-1F991743138F95471523920A3722520E1B2BAD183
SHA-2566C96D1B001363AD4C0D7128D44876F446A2CFACA10DCD57382085800D7AD3CE0
SSDEEP24576:PoG7Cfpo7IJAFstTnOJ1Lbvq6TUxu/11dxMJL+jWAbL2xcayW+krnqsEcX5rwWpu:PfmOu9SUiq+1StptM
TLSHT107D51C56F844DF92CDC07AB8F18F53AA321707BBD1E9600D8C2959187BD71DB0A3AB52
Key Value
FileName./usr/share/man/man1/topmg.1.gz
FileSize3535
MD547CEEA9F6884D8FCACB81BEE2B3A5B99
SHA-13E15EE2D09377935673E9F74002F8FCD0EDCC582
SHA-2565C3CCDF8A89CF090B8E3309981E2B687E2CCB5EBF4346DD2724CC2E8C0266FEE
SSDEEP96:cPBsgiFqqjLokIooEdVWGAPUJNi2q7OmgSeycmt:EUFZj/IAW93/tghmt
TLSHT121716EC29EC1A8E2D7AEE94136E2ADF7C5504743D14C7DE567B082912323BCA459F05C
Key Value
FileName./usr/share/doc/toppic/README.Debian
FileSize395
MD59F1BE0E5BC01366624E688E7A6289E9D
SHA-12A85C921E54A42617DD7AE8CEFBEFECEA0ECE908
SHA-25615B781A7178B651A4AE147E3BC4C42F56C13AF7D7E7EB12803043BDE448FCC2D
SSDEEP6:GLxN82GHe1RvA75fKSMlGde/Ap2dZII1Sx4cXUVEC8FQ6N48ZiaGpcEBNg7HIv:EN8wc5jMlGdfMPcSEA6+1BNkHS
TLSHT1C0E0F1F30393B7233CF14AA9510C31849F1B18D4613722B408544C16E207812B2826F3
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.gz
FileSize642
MD5F0B28350E1E2A694631799991576927A
SHA-100E8DFADFABD41BF89D5AB55A041C881CCE06D66
SHA-256564B1C505C6FEE8F67AE0B48AA02ED972884C31677511AD374AE0C308769CC30
SSDEEP12:XgxQwifeaD1jTjpo+Vo3KCDl0ZyuIQY1XBeXgVMleVFz4X6LS5n9eN:XgxEfea5jTVw3KCDiZ6TRsXGMM34Xv5U
TLSHT102F068E37158A0CC89ADC2F57ED4509D0F6EC37F1C44090351E5464A71B4C9A661CB53
Key Value
FileName./usr/bin/topfd
FileSize1337028
MD575ACFE75A93589881F15079B5AE6E846
SHA-15B2CE3C9B32A4E10FDC8673C82B4A9E0BDBEF72D
SHA-256B5F149F63ACD8BDA4CF7DC5CCE98E601C19433ADF5A3AF1F49794B3884315E9F
SSDEEP24576:OZ0/fvgQnFT1o+n66d4Qqu14h75X5rynZ6Bon0LB:OivNt14B3qZ6nL
TLSHT183550A57F940DF52CDC07AB8F18F536A72131BBAE0E5700D8D2999187BD72DB0A3A642
Key Value
FileName./usr/bin/toppic_gui
FileSize2991816
MD5DED465632E74AFEBAAE560023B07A116
SHA-177D09078A911215DB16851FB849BB253147C4F85
SHA-256FAA716314E1A6AE1D20B4E900E2DF631D4E64463B6159437B4485F923020E266
SSDEEP24576:ujUFFRJGYBQo8Wo4Cwv/u7B5HCQMuD2nFk+FFSEXCmOV52hUGgS2WZu/GV7A9fgP:8UzRUwcTwvEwF1RP+G/QuRZcV85sp
TLSHT1F2D52C56F840DF92C9C07FB8F18F53AA32171BBAD1E9700D8C2965187BD71DB093AA52
Key Value
FileName./usr/bin/topmg_gui
FileSize3049160
MD5C49BB13A5D59C292869FE4D6BB5CA9EB
SHA-19CFAC8E329A5885B3810008EF710164F2E697A84
SHA-2561A9F63369611DF4D9ED895C59A60482AB5246C341FF1BB8678331026B11C3973
SSDEEP24576:dmlyjSZZLCSaDlUOjgIbJ9cXyYLsHVDRschpR33CJFMbfPRsJTsrZuk5/2Ix/fmb:kIuZw/ZrFRs+RHxsY/wQ0
TLSHT1E0E51B56F840DF92CDC07ABCF18F53AA321717BAD1E9700D8C2959187BD71DB0A3AA52
Key Value
FileName./usr/share/man/man1/topdiff.1.gz
FileSize1427
MD58508CB11FB0062732D842992C0F5103F
SHA-1BDE443625DCA168A2E7B457750FF4A3B42BA6CB5
SHA-2564451147E24F8EB7B0C1796C7D247615230DB170690A00B5E9D89099FB0896A9E
SSDEEP24:XDTVR9+7cKMqh7f4W6vUqXBZz8zqz1RUWBoyg5mnfw9Qnt/9RqJEvlwCEIs9R:XXKjhz4/XBZzj1ewo6ptSJEvyF9R
TLSHT1FB21C93C294C4A39CFDFE655292101AD9611A40492A1366EB509C5F0CF663BCA679573
Key Value
FileName./usr/bin/topdiff
FileSize1865416
MD5488F71FF0B178CC1FCF1EB344E022FE4
SHA-1EE63B4C3648D3571833A8FE7F44A6DB77A8652F1
SHA-2561EFA18CAADC78FAD97B876833ED069CF39E079D43D528DE6AD197CF8E880F01C
SSDEEP24576:oZkQ6cH72JB6Jk1zY83oQZde7dpbgIelQ/9F0toxSF8S3x7:oZ3oRgPklw9A82
TLSHT1BB851B57F840DF92CDC07AB8F18F536A321707BAE1E9700D8C2955187BD76DA0A3AB52
Key Value
FileName./usr/share/doc/toppic/copyright
FileSize11547
MD544023D008A494F53E0A77BF27858AD33
SHA-104B3862797896C9D46DEC86867C000B36D5CEB17
SHA-2566A4EF227AE9B870F453F68F6BCCE2490EBC0969509B74B3E63E4F999AD8FDFF9
SSDEEP192:3mD8TPzHbvt6DeOXQH+TQHanHmTQrs6r1P3H3JajmbM2IOrXijoLt3i73hU9pjSK:3+8TP/vQDnXrT5kQrsINXJMmbfPrSjAz
TLSHT11832C71EBDC00B7309DC1AD2BA1D64C9B12AA41F7A668ACC645EF2150BB741DC0F6377
Key Value
FileName./usr/share/man/man1/toppic.1.gz
FileSize3706
MD551FBC0160B68799D7D6FA1F9C9BA1936
SHA-1A927CC04971DBEACBCE28ADBE20D876068D9198D
SHA-2566C5B9F79EB72EBC28F8317179A26C058F199DCF8FB90D53E78B12625714D2A6B
SSDEEP96:B6xe0FBZWYnxj6r1hIL0tVjjhhetKLb00leq:B6xBnZWYU1hKymULb00Mq
TLSHT153717EAD3A874C40D25FB2CAC0C7A912EB36C20FCDE8F8F5255E75353159B541205999
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.armel.gz
FileSize217
MD54D1B95444CDCB10F7E402593B008028D
SHA-17B889880EB74692E62909562208824A27BF0E353
SHA-2563320A3CD039E9A14594087FF849449B97E44F6D42F2E921FEA11572D4313CE12
SSDEEP6:XtY3z7XzYOnZdNqhhPskMHWj/b5G68dAl:XY/DYc4hhSWv5G68dAl
TLSHT11DD02301677D976CEDCCFE6C595DD414718D2C400AF36D1A5E287401025D9038E829C9
Key Value
FileName./usr/bin/topdiff_gui
FileSize1930952
MD51F7E5E2608158CB876FAB76EF1EC5EFC
SHA-1487AE7601BE81D036FE739B2EAC7332DE58CEDA8
SHA-256ADC210D7BF0B25C4CE3194294D035AAE1C5C3655E2FB6C3B4DFA087F9B06231D
SSDEEP24576:C2UR60CucCnGEh34OLgu7JvVodDNmJsODegD7z4YRpFk6RS5l4D:pU8xwY9/gnkoSq
TLSHT1CC952B57F880DF92CDC07AB8F18F536A321717BAD1E9700D8C2956287BD71DA0A3A752





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