Key | Value |
---|---|
FileSize | 2689252 |
MD5 | 5FED1B2676512142071772FA0CFAA0B7 |
PackageDescription | efficient phylogenetic software by maximum likelihood IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others: . * A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014) |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | iqtree |
PackageSection | science |
PackageVersion | 1.6.1+dfsg-1 |
SHA-1 | 8B8714D1AA73E4374038989ED0A56DD9F35965BC |
SHA-256 | 7845B27FAA4904BB80A74DDD53EACA9000E562ED0329CFAA043FB11E981F956D |
hashlookup:children-total | 14 |
hashlookup:trust | 50 |
The searched file hash includes 14 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/models.nex.gz |
FileSize | 50589 |
MD5 | 92CB38E853A235C3804732DCA63AF996 |
SHA-1 | 2CA1103FB8EF8503ACC923350076CCA25AE1B66F |
SHA-256 | 146C3ECF29E4CD29407B925D313BC24DC6E251D11E258C4F1EEB409F2CF800E6 |
SSDEEP | 1536:Edy7djgVw/NV4cIL+I+J+tFpHzMcaIk/1PBsa:EdVVw/NV5GCMrmIUJea |
TLSH | T1EE3301C8456103B2D1FDE8B77C36038829F5B2A92EF9BBA2F131C1135EC4E54B615C5A |
Key | Value |
---|---|
FileName | ./usr/share/doc/ncbi-epcr/README.test |
FileSize | 278 |
MD5 | 2DE4573BC735E689F789D7662AB0497B |
SHA-1 | 34200C528591A6F25552E67122DAA479F2C54753 |
SHA-256 | 661779DB6A77C9045E836BDFEBA7DFEC1A17CAF079E40B27E6E0C22242CB4312 |
SSDEEP | 3:OpKL62NMGlGmIRCvH7xd7777777777777777777777777777777777777TjvvlGr:OpK+2NHlGq7vlGkwyAK9EOMfyGYL6f |
TLSH | T1C8D0223712C688063100CC8E19898131E41DB02E723800C02928391C97CC8324943CB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.phy.gz |
FileSize | 8098 |
MD5 | 789D2B0EC8B665A90E647F108FD02FD9 |
SHA-1 | 5DA9B670104C9230C5379E60E2BB58EA400CE6F3 |
SHA-256 | BB9DCEC98F38D9FF9D0978CCC6A54B8CD53B230A3983212D6A589095486C0FFD |
SSDEEP | 192:VbpqbtksNuBWxTcpkcngvh0ZV9OEwUoR2NEv/FAzxuqEM:VFqbSsNuBgcgvgV4Uo1VAzdEM |
TLSH | T1CEF1BF8C08F5D902B111E8C68F713ED5DD9D9404C709E3E2A4C8A95F1EC43BCCA948A2 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.nex |
FileSize | 174 |
MD5 | D064E66F36E2EFC6C441F46EA1E02BA6 |
SHA-1 | 701F6A74581E150712F7F87859DF282EABBCD885 |
SHA-256 | 359F1C6BDBAEA2AAFF49F233B9BA9AFECAD653AB68442775240E228A196EFF83 |
SSDEEP | 3:bDHMLsve0aEXWARFYWLwI4QWARFY6cDQWARFYwYaAlvvsGQVEXRQMkcPNl+Pc+MK:vJG0PB5EI4g2DgTbAlvvsNEXRQrcbN1K |
TLSH | T10EC08C124FA073D6180C8B271CAB0AACC86A1082A60BCCCC80B81CF530C3E010321FB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/changelog.Debian.gz |
FileSize | 1039 |
MD5 | 453D3CEBCA4EB584EC45FD3005F89124 |
SHA-1 | 718A739DFE6913677F600A363CF70C6E61ADAB69 |
SHA-256 | D6FC54303216756749A70FF96F647B3B23C9571411191D4C793F31FCE69E1CA5 |
SSDEEP | 24:XzdzOPg3zFUSqQhM3TGnEQwH81LjFZUs49+:XzdzOPGySxUTwEQwc1LfUs49+ |
TLSH | T18C11D8C220628C25F04D007485CADAAEE58E481C97FCDCBF9825284E92A701BC25149A |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-mpi |
FileSize | 5390888 |
MD5 | 42A9CEA67D3070D88E6346A1EA8D0D89 |
SHA-1 | 7862281E8509358CB68BE2E23B782BB438EFCA68 |
SHA-256 | B19A952C9EF6816EB7A1EBA26ADA944D1FF31C17FCD57AF37E7BA824D6EEB2C7 |
SSDEEP | 49152:/PzM1wiG0iRC49ewj8O89h1vZhHkC8vJ36Tszm3IoXJWkowOqsECNASSKbkoiGBW:X2yhb8V9jHk/V655rQNASS4rB+K4Fhr |
TLSH | T1E8466C47E1D278ACC497D4301397BAB2A520787C45753A7E75888B321F37EE09B2AF52 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree |
FileSize | 5276200 |
MD5 | 2214715F6C172694029ABC32CC2FACAB |
SHA-1 | 9AF8A6696CD61FE18279145C5C79B917FE7C2EF0 |
SHA-256 | 6E1F89EE4F7A97F79F4B8D879B6E36154C0C0EA8669634A75B5DA21FC252311C |
SSDEEP | 98304:f5T4d51Pn8HyhxycQCchMZB1hl+NsK/8x8+h:RYHnxycQKdhl+eK0x |
TLSH | T1BB368D47E2D168ACD497D43013D76AB2E520787C41753A7E3A888A321F77FE09B29B53 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree.1.gz |
FileSize | 5773 |
MD5 | F9D4454E6B735965495F883267D87021 |
SHA-1 | C72CC736801F067AC3C80379432517B4BF733993 |
SHA-256 | 3768B65B76992B40AF2C8A78C92E8C17C0E4A92B4107A54E384BC8AF037143D0 |
SSDEEP | 96:FjEzlNBKzp7PyNm/Gcmzo4kfRCa4Y5VxPKZePir3MVjPw8vEGTg:FQBKxPug4kf4DsPn03EjhFg |
TLSH | T120C17DC95270D20A581C8C32110F183C7FDBCF8D655280E2B266AA6E6EC2397B2EA571 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.cf.gz |
FileSize | 114490 |
MD5 | A38EB3E6B9B66F70805442FD99021ABC |
SHA-1 | 175C32E31F53AD71EA4C4CC58A8A3E41CD8552D5 |
SHA-256 | 6BF576498591D22F498567C7D59D07416CA92C5366EF2E085D56DF3A78AB6DC9 |
SSDEEP | 3072:cHYgzQ3dPW1Suu/2M4Dv6TWMXL5FfQIf901GxDgx1QrfIXx09AEy60GO:0zQNiDu/2M4DvAd7QRx15fp |
TLSH | T182B3127D04B95D1EFD87CAC9C086E647AA1234C9C7CDA466E4D142CF88076329EA58FE |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-omp |
FileSize | 5276200 |
MD5 | 59F3A11143E4ECEB5BFC325688A9B565 |
SHA-1 | 746904755BDEA3E566922FDCE9B79FAF4CBC2F53 |
SHA-256 | 07212B63ABB9C433B02AC8E6DC1F9C9D5B3ADDC53CE4A29A29082B2B1567701A |
SSDEEP | 98304:55T4d51Pn8HyhxycQCchMZB1hl+NsK/8x8+h:nYHnxycQKdhl+eK0x |
TLSH | T111368D47E2D168ACD497D43013D76AB2E520787C41753A7E3A888A321F77FE09B29B53 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/copyright |
FileSize | 7971 |
MD5 | 68D1E206102D7159F1073BDBCE5A9DB9 |
SHA-1 | 35928699B5928C497D60DD90F05237AEC612E599 |
SHA-256 | 82A7D998755F13F088002CD23D8C400023C0BFC572F360C9C2DBE24463D8D737 |
SSDEEP | 192:HBuMzs+EaI0mMkMV5y8Ezs3LshgXTxs2F3n:HBuMzs+E1bOV5Czs3LshYTxs2F3 |
TLSH | T1ECF109483140C7B7A1C033C26C966ED5E32BE7E772B94E81345DC25E5B1692E12FA8F4 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-mpi.1.gz |
FileSize | 904 |
MD5 | E13AD56A117DED8698704F52CA62816A |
SHA-1 | D8107F4FCDDCF6FF9E55D0840CD7B62838177314 |
SHA-256 | 6D3B6D2921336CE4DCF54CD57200D8E4DFDC059906A95CC26F0351979DE65799 |
SSDEEP | 24:XQ5VA4H26dKQiJOTBHe0vnvDOF0vIh9+y8UE1:XaPH26KOT8+v9If/8L1 |
TLSH | T13D1196E6CA8747CBD3A08055D5305F8047C1D2CF890157C95E27CFB190E0C655928E6C |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-omp.1.gz |
FileSize | 5795 |
MD5 | 0AE16DCBD9198160B1583463519EFE68 |
SHA-1 | E7F18EC7FE0A51CB372CDB6CFE628830E85AAF59 |
SHA-256 | 2C7002B8E30E0AB3DD06A7126E87C62F330510DDB5AEE5C1E54A968727EEA6B7 |
SSDEEP | 96:50LcQK9AuC5qifpjX80Mx+VJUHxAbZ18OZAVj+5gpRNUwM3e:CpKe8ijXzVmHub8O4fpMwZ |
TLSH | T1C0C19CE7CB9B609027DD2DD0210DD4B1049BB3208E811EBFC2064B9176EF8E2DBA8099 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/run-unit-test |
FileSize | 2045 |
MD5 | BC20D54C0B2020C189F1B9FD66B79A0D |
SHA-1 | 245672DB9AF15138E0FE99E76EB658E680A6D434 |
SHA-256 | A36E93FACBDDE341A02D14159A2C3DE48CE563C3CCC2C2A72A0D151D42C5472C |
SSDEEP | 48:WCdg/4OU65sBbk3/BisAh/A0ZU/0a2TzVnn:Rgg/Wyb4Zi5h/A0k2Vnn |
TLSH | T10041A149C344F0387022F65CA56A31D206E91209CF949E3A54C03A2678F8E9F77FB7E2 |