Key | Value |
---|---|
FileSize | 6688516 |
MD5 | 1AFF048399CE8C2C20176118160AA4BB |
PackageDescription | in-memory DNA sequence kmer counting, filtering & graph traversal khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name. |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | khmer |
PackageSection | science |
PackageVersion | 2.1.2+dfsg-8 |
SHA-1 | 832B42B2645BB561BD968F1A14023E4F8901E1AD |
SHA-256 | 996D4673244DA0AC699599DC93F417CA3BAE5E816453E93D99A99B1DC101C448 |
hashlookup:children-total | 224 |
hashlookup:trust | 50 |
The searched file hash includes 224 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/test_graph.py |
FileSize | 11047 |
MD5 | DF1DADC9F3E88925AC00C6A7F3A6DA74 |
SHA-1 | 00592F1090C7B9C5AEDE6DB9BC0F9D31E2662AA2 |
SHA-256 | 60B10B738C05A5AA08F8C50C4F5292D8EE20D4EDFEB7359B287726EC5D567929 |
SSDEEP | 192:ZtrstrsY5E3W3qm9ZUXSCmWKFl9PwmUKFl9PKl22uKpd3ERBlGQfYmS:rrstrsC2Iq6ZUXSCmWKFl9PwmUKFl9PG |
TLSH | T13332350AC46B4832A313E97686A77C05B1D4BD4F250B8815B5DC80A0AF61A79E1F7FF6 |
Key | Value |
---|---|
FileName | ./usr/bin/khmer |
FileSize | 569 |
MD5 | E00C446782F9A6CC2D721EAC281C5F12 |
SHA-1 | 00B90B1A588A98410A7C062DFC9140E39317C7B3 |
SHA-256 | E3235C6E0B28C3D8E0839374F6252B113388EDD02F38B43CF9F8C2D6891261DB |
SSDEEP | 12:VsrgKtm3Ejah/KSqDIgIZ/IRzKd6viRWvTD6b:Vsr/UEEDPgIZ/nGyETD6b |
TLSH | T13DF0EB1A7A3C5730A88231231C35B62E23C902C84C29F82651788BA5A170F1728D3E15 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/test-data/test-abund-read-2.fa |
FileSize | 24138 |
MD5 | 407E3BB00A686ACC796F387862EF0202 |
SHA-1 | 014A00EC74B50C4B2F4B4B9578005942D55757E9 |
SHA-256 | 621623340CA46D108161B8EAD6D58122374FC70013D9999FE7ABB9A4E3E3982E |
SSDEEP | 48:TRkcgiTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTW:9PgD |
TLSH | T1B8B2003E3DE0F883F8C0094B0A8453D2D8D89C354B4FFA11F799020C8DB8D4A780B48A |
Key | Value |
---|---|
FileName | ./usr/share/doc/liboxli1/copyright |
FileSize | 4466 |
MD5 | E28566598EABF96D132CAA184918457D |
SHA-1 | 01FA2F1E49D6057EB892979E16A9B691241E063F |
SHA-256 | 65BB1DC580553CE7B9A42873C839D75F4F019D2DBAE5ED1B4211F94A48BAD05D |
SSDEEP | 96:KvPiJI7/kYrYJcrYJ5ZPH33uv3JjYT5Hzbus5BeOFQH+t:KiJIwYrscrs/PH33S39a5WsDeOFQH+t |
TLSH | T1DA91DB1B7344077526E257802966BBD9B25AB01E7B777E047CBDE2242B3701CD6F21A0 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/__init__.py |
FileSize | 1795 |
MD5 | F5A7E14C912BEA9D951BF642F14EB3DC |
SHA-1 | 02242567E0A74A72862A287C41AB402A81F8DA2E |
SHA-256 | 0859A4005D6D6A5A1CF3910944782D466ABF36BE87C276108BD994C8B56F71C1 |
SSDEEP | 48:KE0fOtrYJtrYJ++yAP+Cg43hNq3aEoma3tOTH1D:2GtrYJtrYJ++y5E3zq3aBMTZ |
TLSH | T1C931998322441F734BD14751562EBEC8B35E802E39237F06386EE3E563AB51E95F7590 |
Key | Value |
---|---|
FileName | ./usr/lib/khmer/bin/abundance-dist-single.py |
FileSize | 8973 |
MD5 | CE90DFB0531FB728765102991123A75B |
SHA-1 | 0246C0DA4E07018CC0D41FED27BB86071942A028 |
SHA-256 | 652FBF34F660D10274004B2F41A1BC9929ED12F0FAD3040E6AC137C07AC6B2AC |
SSDEEP | 192:ItrstrsY5E3W3qmxuZwwL0j7MFYFqtaS18LJgUtdS1eLJmmb:crstrsC2IqWuZwwLfFYmVN5c |
TLSH | T14502C80A0A4D42626FD346B835AE7E4E2201D21F6F03AE19F2DCD3142F4A93A85FB575 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/test-data/simple-genome.fa |
FileSize | 1009 |
MD5 | DA4E009CEE8F5C03936FA8B5B7E9BF95 |
SHA-1 | 043BB005C49DAE3F5AE7B8E5024B68775562AA79 |
SHA-256 | 202757EE79C8A2490AAD9F41E5CECEC01146ECABA790B9B721E749168697ADC3 |
SSDEEP | 24:YmOu5wuv63z5mFibRYi4X5N42BUlkiMSkEdGK:Ym5wMFrxX34si1kfK |
TLSH | T198115EB4A3F47976729605470EECA3C2C8E47D794E17AA322FE11A1B0D74826F46A00F |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/test-data/test-overlap1.fa |
FileSize | 1310000 |
MD5 | 47D4A4A1B9DE2049BFD72A8A8B87E17C |
SHA-1 | 048A23A40F853D157A5BEDE85C1CE4679A5D4026 |
SHA-256 | 934F8988E4580BBFBF77FC5099E8A5A1E84734CFBD77DA15F8F73F80511CDEDA |
SSDEEP | 24576:oZixE5k12suraODNH6mdRTI4KaoVDIWo7w8AvaPStWiggI+BZ2SLinHf/0Zig+nP:oZixE5k10rrDd6mdZI2oVHKwHaKtLggg |
TLSH | T12B552EB5EBF4696232D2040B0DBDF3C38CA87C6A4E27B6117F71550E6F744A9F62604A |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/test-data/paired.fa.2 |
FileSize | 414 |
MD5 | 7A86EE00A7B8443AA798FBAAFB3EC3A9 |
SHA-1 | 052E64F295759C64A85B9DC794052EFA57322FB6 |
SHA-256 | 0540292160B0C7FC4A966DA48FA3659BA79C9D086FAA574A2F7B939A42F76FC7 |
SSDEEP | 6:CejKM6CzmtLvSbmkURhU0BSjKM6CzmtLvSbmkURhU0BSjKM6CzmtLvSbmkURhU02:Xjx0dk0XBSjx0dk0XBSjx0dk0XBM |
TLSH | T103E0923C3EE0E8C3B0D001430DCC93D2A0A09C2A9F47FB212B55010C0E30C49B80388A |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/khmer/tests/test-data/paired-broken.fq.2 |
FileSize | 511 |
MD5 | B2BE8AD6507A9D856DF256A1354F7402 |
SHA-1 | 0557A3ADE60B79FD32450AA6AB3B28C6EF532557 |
SHA-256 | 01D09AE4E9AE64770F0B5358AA4BAB2F17CE552F97FDDAB1A6FF6CA9CFAD831F |
SSDEEP | 6:9jKM6CzmtLvSbmkURhU0BX5zUjKM6CzmtLvSbmkURhU0BX5v:9jx0dk0XBX54jx0dk0XBX5v |
TLSH | T137F0673C3EE0E8C3A3C205530D8AA3D290A09C2A9F47FB213B1D010C0F70D49F81348A |