Result for 3F36FBD5C2121DC1CAD1FB0DEBFA162CA6D63B3A

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Children (15)

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Key Value
FileSize1767408
MD5E5B51141A53245C10BD2D45EE7414683
PackageDescriptionTop-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples.
PackageMaintainerThe Debichem Group <debichem-devel@lists.alioth.debian.org>
PackageNametoppic
PackageSectionscience
PackageVersion1.3.0+dfsg1-4+b1
SHA-13F36FBD5C2121DC1CAD1FB0DEBFA162CA6D63B3A
SHA-256485B9A78399BFD970F2FAC228016482E4035A5AE56B55DDE2B2CDDE8ECEAAF20
hashlookup:children-total15
hashlookup:trust50

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Children (Total: 15)

The searched file hash includes 15 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/man/man1/topfd.1.gz
FileSize1782
MD50F1ACE6CE2995E873451A8C2898E075C
SHA-1F04FD48BC3BAA084611E86DC26AE4B48BE44F274
SHA-256B329D87F5B90C41E97EC98D417CDFF48C0F7CB3237F4F968B4396B3D3220326C
SSDEEP48:X8EYTifWKUlTXI0B82L44MYsGM0I0Ta9Aul:sEYTi3Ulc0K2hsGMgTaey
TLSHT1CE314B0CDE196BA4CCF50D6B332051100693BF723285C136BE366B80498561242C8D67
Key Value
FileName./usr/bin/topdiff
FileSize2357908
MD5C173C601FEC1DF013C01DB97BB51289D
SHA-1DC88AFE14ADEE06D60909FE7B53302E957CB9EB9
SHA-25633FE536D03E78B57F3670A51197A4B6BFF6AB2CF5A89718676FA009035838B1F
SSDEEP24576:Me772P4+GZfl6YrjVjbCFceu6jky8TM7kzWvD:MO6AjBN8kzQD
TLSHT18EB50841BF842FF7C8EBCDB2696B9356095F5C93608C1C267CE4C48CAA4A18D5FA752C
Key Value
FileName./usr/share/man/man1/topmg.1.gz
FileSize3535
MD547CEEA9F6884D8FCACB81BEE2B3A5B99
SHA-13E15EE2D09377935673E9F74002F8FCD0EDCC582
SHA-2565C3CCDF8A89CF090B8E3309981E2B687E2CCB5EBF4346DD2724CC2E8C0266FEE
SSDEEP96:cPBsgiFqqjLokIooEdVWGAPUJNi2q7OmgSeycmt:EUFZj/IAW93/tghmt
TLSHT121716EC29EC1A8E2D7AEE94136E2ADF7C5504743D14C7DE567B082912323BCA459F05C
Key Value
FileName./usr/share/doc/toppic/README.Debian
FileSize395
MD59F1BE0E5BC01366624E688E7A6289E9D
SHA-12A85C921E54A42617DD7AE8CEFBEFECEA0ECE908
SHA-25615B781A7178B651A4AE147E3BC4C42F56C13AF7D7E7EB12803043BDE448FCC2D
SSDEEP6:GLxN82GHe1RvA75fKSMlGde/Ap2dZII1Sx4cXUVEC8FQ6N48ZiaGpcEBNg7HIv:EN8wc5jMlGdfMPcSEA6+1BNkHS
TLSHT1C0E0F1F30393B7233CF14AA9510C31849F1B18D4613722B408544C16E207812B2826F3
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.gz
FileSize642
MD5F0B28350E1E2A694631799991576927A
SHA-100E8DFADFABD41BF89D5AB55A041C881CCE06D66
SHA-256564B1C505C6FEE8F67AE0B48AA02ED972884C31677511AD374AE0C308769CC30
SSDEEP12:XgxQwifeaD1jTjpo+Vo3KCDl0ZyuIQY1XBeXgVMleVFz4X6LS5n9eN:XgxEfea5jTVw3KCDiZ6TRsXGMM34Xv5U
TLSHT102F068E37158A0CC89ADC2F57ED4509D0F6EC37F1C44090351E5464A71B4C9A661CB53
Key Value
FileName./usr/bin/topmg_gui
FileSize3845868
MD5221F7E43D81353B754484672CD75AFD9
SHA-1BBFCEBF41DA28DBF2A069D9E5D8862036A824E9D
SHA-256DC02CCA036051D59D8FD24AC208C713E3AF05CB30C015DE87D4C044E34819DA0
SSDEEP24576:bYXrKn5ANL7njG1q/cY6zKp0q3n6nDExLsl7uA4to5TfHULGy/osJfns6fa+6:h5A2KwXLHM/oz6K
TLSHT1F3060740BF051FEBC8EBCDB29A6FD3160A8D5C93518D1C3578A4848CBA9B28D5F9791C
Key Value
FileName./usr/share/man/man1/topdiff.1.gz
FileSize1427
MD58508CB11FB0062732D842992C0F5103F
SHA-1BDE443625DCA168A2E7B457750FF4A3B42BA6CB5
SHA-2564451147E24F8EB7B0C1796C7D247615230DB170690A00B5E9D89099FB0896A9E
SSDEEP24:XDTVR9+7cKMqh7f4W6vUqXBZz8zqz1RUWBoyg5mnfw9Qnt/9RqJEvlwCEIs9R:XXKjhz4/XBZzj1ewo6ptSJEvyF9R
TLSHT1FB21C93C294C4A39CFDFE655292101AD9611A40492A1366EB509C5F0CF663BCA679573
Key Value
FileName./usr/bin/toppic_gui
FileSize3794680
MD5C8D8BFE71B83CDB8C8B71A2A0DF37770
SHA-1D8B042875F2ACC8740A6264AECB07B1852B9F021
SHA-2565EE91AD55920BB0328A29D4C55921B7DAB5862F3D7D097A59EECCFFCDC8B5E77
SSDEEP24576:VRgbKLBJZLNoQlC+Khj9Y3wLs84i1yx8ffvLHDc04cvLM7d7FyDxhUUdf3hakyH:jcKLFlM9IAc0Xi74UUd/hakyH
TLSHT1F806F740BF441FFBC8EBCDB2A96ED7160A8D9C93518D1C357CA4848CA99B18C5F9792C
Key Value
FileName./usr/share/doc/toppic/copyright
FileSize11547
MD544023D008A494F53E0A77BF27858AD33
SHA-104B3862797896C9D46DEC86867C000B36D5CEB17
SHA-2566A4EF227AE9B870F453F68F6BCCE2490EBC0969509B74B3E63E4F999AD8FDFF9
SSDEEP192:3mD8TPzHbvt6DeOXQH+TQHanHmTQrs6r1P3H3JajmbM2IOrXijoLt3i73hU9pjSK:3+8TP/vQDnXrT5kQrsINXJMmbfPrSjAz
TLSHT11832C71EBDC00B7309DC1AD2BA1D64C9B12AA41F7A668ACC645EF2150BB741DC0F6377
Key Value
FileName./usr/share/man/man1/toppic.1.gz
FileSize3706
MD551FBC0160B68799D7D6FA1F9C9BA1936
SHA-1A927CC04971DBEACBCE28ADBE20D876068D9198D
SHA-2566C5B9F79EB72EBC28F8317179A26C058F199DCF8FB90D53E78B12625714D2A6B
SSDEEP96:B6xe0FBZWYnxj6r1hIL0tVjjhhetKLb00leq:B6xBnZWYU1hKymULb00Mq
TLSHT153717EAD3A874C40D25FB2CAC0C7A912EB36C20FCDE8F8F5255E75353159B541205999
Key Value
FileName./usr/bin/topfd
FileSize1677088
MD56DAC9EB450AD08EBED6DF12AD93E6C41
SHA-14BDD2230CEB1D9527EA034676F57BD09D8D5E382
SHA-256716C2752CD8232880D3EC7798DAA42ACADB9B163894B8CC6FE78D7483A537C38
SSDEEP12288:hRozEnLeLvFYXnUrbkkU5pZ6qaH3fg1FVGWmjzDM9OX2TDzcM8sx1q6q7mjzf2Mv:hiEL3lnTPCzTE18SoVnHbnjmJNeo6qb
TLSHT11875F740FF542FFBC8DBCDB5593FD35A088E8C93658C1C2A7CA8869CA94718C4A9765C
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.mipsel.gz
FileSize227
MD576E91AC1E79F146B60D9EAD968D5731E
SHA-1857CBC1D49B308ED6C9610CC728AD7477F2C38C4
SHA-256992C2B1CCA13C8C5AF8B15908638E8D6B613082C3C6ED57C3DC2C28094E6438B
SSDEEP6:XtTKGktwa3ARk9Z+rWOEk5Ao4NU+HVhKmRKcZkn:XRqwa3V9ZIFULNU+HVhbRBk
TLSHT166D097488232D67052C42A3B35340D8C1CC242070A28B8A1114086F2C0D20B4A8808D6
Key Value
FileName./usr/bin/topmg
FileSize3678956
MD5DBA02D55E4334975C52BD5EF7B3A8E86
SHA-1EF7D411B81FEACF4E98A782FEE5BDE17BBD44FF7
SHA-25636ED5AB2D4F3CB75829CA56E9D2D4DD79C148678A331C619EFF43BE545CE8C75
SSDEEP24576:3OJv2uUUuAUYD/XP5ZHN3bInUHVcoqwRdCWb1slj7HBmNAz/UXcx7oUW8PXkcJ9R:3OhI8HlbKlAczAsjZk
TLSHT122061941BF142FEBC4EBCDB19A5FD756098D4CA7508E1C3A78E4848CA94B28D1F87A5C
Key Value
FileName./usr/bin/toppic
FileSize3619388
MD56C8E2613604C951FD9801D09A96AA666
SHA-1651309B92BA14541EEF627DA7036F71378C3B1C3
SHA-256991B35677A6B41971768A36E6D6D75028D307A6AF065C2D4911ED525A819F2E9
SSDEEP24576:ZeWh2SEd5EiCCJTSp8ElnqfwoKMsbkTtmtu7Fwbbd7yvc28HR7bZOxMBEmaKn7X:ZjdRp8cqj7Fqbd7yvc3HTOtKT
TLSHT1C8F5F640BF551FEBC8EBCDB2AE6ED756094E5C57608E1C267CA4C48CA90B28C1F9791C
Key Value
FileName./usr/bin/topdiff_gui
FileSize2442336
MD53CCD53BC838D97F12DB318803FCAF329
SHA-15B84AFD4F954E1FF4B62AFF13D013DE16ECD9537
SHA-25659E7A7EF74902108D72B4C1C57408380FA2E3BA6B0B486607455822EFA2C2448
SSDEEP24576:r8TT5w3vuO+awV+McfXZfZ4YP9kP2p8rBowVPH:4/ccCXcBbxH
TLSHT172B5F840AF442FFBC8EBCDB2997FD356088E5C93608E1C3678A4C98CA94618D5F9795C





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