Key | Value |
---|---|
FileSize | 1647472 |
MD5 | AC830C66945F8CFB4948920F216EC9E4 |
PackageDescription | profile hidden Markov models for protein sequence analysis HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries. . Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family. |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | hmmer2 |
PackageSection | science |
PackageVersion | 2.3.2+dfsg-6 |
SHA-1 | 3AF6F08767D1806D74753B682038E231D0F72300 |
SHA-256 | 15F02E24E41FB3EC3F04DE5FC6DA4E6C59E2E0C5F8242CF55D90A61CC0FA3681 |
hashlookup:children-total | 85 |
hashlookup:trust | 50 |
The searched file hash includes 85 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/exercises-pvm.sqc |
FileSize | 592 |
MD5 | C1267F5BBE9F94CA6AD8AEF0DB892384 |
SHA-1 | 07D3F1468D309EA7096DB5C6283F981B02F31245 |
SHA-256 | 29A61BB39DFB370769983F8B44468860F6C6CD5CB91A36DEE4742B6D6C399787 |
SSDEEP | 6:SBNWV2xxVrE26a6fKqQTQU+1omEALBJn5sWbeT9xTfv8rUqiL5RZgO7T92BRV0Tq:VV2xgPfKqi+12c+VH8ZiLZ6APZffGPZR |
TLSH | T10EF0E11C630F851010B47675349836F4DD12DAEC234E283BB80CD05E0386B04D367967 |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/fn3-bin-swap.gz |
FileSize | 7593 |
MD5 | 63B73CA2054B8498DE3B29439C89CEED |
SHA-1 | 10194AA6DDCA09CA7071692BAE76E7A006FEE3C1 |
SHA-256 | 087D3058ECFFBD993C726395F43545650FF6680F5E3B8DAD5A11FC20A495C1B4 |
SSDEEP | 192:ZPMc72s0Pnwabz4YjLC5djIXx59teqluFNzv8u2wnrv:gnwabUY3CjjIx5nR0zrzj |
TLSH | T159F19FD8A4DE8071479B3AF13533EDE33EA74F8E99E568B83D1AD51A00618294369532 |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/titin.fa.gz |
FileSize | 15145 |
MD5 | D142CD1BB3518EFCA0154664714F2F7C |
SHA-1 | 10EFA52672B1C4D4F7615EE92032A78622305907 |
SHA-256 | D02F90C24E8CCF11C4F036F3015A438A2D5935C98AA426B54DF3669A9C624FAB |
SSDEEP | 384:zmx9lPZShWYOWB2taaLBuI6D0rwTxIC17LAgg9CrLH/llAukRWe+JYLoX4hhoeOe:zu9lYHBK96D08TxIsHAp9CnH/vAOe+gp |
TLSH | T17A62D08C542FF60C80605A4D33A26FE5B600AA503272588F4B5DBF522B867DA2E79490 |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/Optiontests.slx |
FileSize | 297 |
MD5 | FC1BA0E23EE5826BCFB00916019ED5D2 |
SHA-1 | 12CC5E133AAD00EEB6D2BC206F07C08E6EDA8578 |
SHA-256 | 192E416DBD5CC6B07979EF65B8191931B84ECD842CBAECBFFC8DADE07A105C91 |
SSDEEP | 6:Si3KsG9h9yfhON5SfhOrmSfhOb/MfhOJfhOB0fhOnfhOP5SfhOa:33KsGr0pOSp7Sp00pUp7pKpQ5Sp7 |
TLSH | T1A2E024C78C2E050B2B4C0028AC8012B21C4523D687062616B4FE2B08B7F0AC3A422E84 |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/trace_test.slx |
FileSize | 112 |
MD5 | D7B4882E599A64F21A6A0646150EBCA2 |
SHA-1 | 19ADF1C260BC689CB93C94356DFC743015B10ECE |
SHA-256 | 169D3BDA22A068F82EE8066DB9544E9D78803D785138EDE90A2CE9151204DF68 |
SSDEEP | 3:35MuBWAUXFvSuBWAUW52/uBWAURF+jDuBWAUQe/uBWAUTFkWmDuBWAUS/MuBn:KEUVvSEUWo/EUj6EUQe/EUJk/EUS0Y |
TLSH | T194B001C335035800030C0038CCC306F75401374B1706B3B545DD3B5DF450CC0041B443 |
Key | Value |
---|---|
CRC32 | F42B1CCB |
FileName | usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/data/BLOSUM62 |
FileSize | 2122 |
MD5 | B751F546A5FA0E9D7DEAD9E65FE1F09B |
OpSystemCode | 362 |
ProductCode | 13960 |
RDS:package_id | 182052 |
SHA-1 | 1D4C63B975D1D2860F9ED9F10B90F60E893D31EF |
SHA-256 | 85510D3846EE6D5F4778E425CF8DAF6E0DBB889B306F2D13434E1254780EFB40 |
SHA-512 | 2200A22EFBEF9CEAD2180327C3339F74F0B743F0AAAA7A4A171FC0CD4D35CD9CEF5AE2A4966EA382D153CC4ED32D7AA50DE1908498AFE6BC01BE96E01BFFEA97 |
SSDEEP | 48:6QR+nm49JXM63eTWccOsmj/JJg0zbudsB88AFS2TDz3vmQm/XNCOvYXb5kZEUEQq:HR+z95r3eTGOR/Xg0zbuqeS43vvm+dHL |
SpecialCode | |
TLSH | T17F4136A459FB21BCA7F940D60DFA0FEC4918522F1EA9B531F11D73404336E781A8EA21 |
db | nsrl_modern_rds |
insert-timestamp | 1728992340.096743 |
mimetype | text/plain |
source | snap:N5wcyFCjMeVF52rBn3YjxIanpCo5ifFJ_1 |
tar:gname | root |
tar:uname | root |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/tophits_test.o.gz |
FileSize | 8116 |
MD5 | 25D589FBA1198ACB90D2152CE69A68FA |
SHA-1 | 20C564943E345DEA14F146B4F049C0C8DEC861E6 |
SHA-256 | 6D8189B7C324A9F80070EC48D7BC456B5DF9CE42B507D6FDFE3DC0615964EE51 |
SSDEEP | 192:4gNTB/2riR8761BeGvZx6z15ebOosZd4l6czgpzGRr6bI:4gNluriN3ZxT4bc6zurJ |
TLSH | T199F1AFE27C7FD1AE08633DF6C88289DA4691535C210F781335DA82D3533E1AA2B265F7 |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/fn3.seed.gz |
FileSize | 8692 |
MD5 | C49EFE2E7235FB65B44930AAF4E278F5 |
SHA-1 | 22FB5369E296288668BEE3D82208C141FDE409F8 |
SHA-256 | 512404110C9B46A9D2E2201A518FA6E342F6CE661279C31E7FF6F20F341131EA |
SSDEEP | 192:6r1l8PMmlQC6rU9hmDTSc/L5/KK2Fb9zdVVcSnBDck9:6P8HOUjFy/KnFb9zdTcSBgk9 |
TLSH | T13C02BF066D1D7F730DAC5F3CB78E48325DF649A380581099E85EF06865C15E23FD862A |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/examples/Optiontests.sto |
FileSize | 3271 |
MD5 | E8C818C2EA1C4E4CEE35827F580C1DB4 |
RDS:package_id | 182052 |
SHA-1 | 25A7BA8D504A53895DB317122C0F2D53FEEEEEEF |
SHA-256 | CE3A702636A80AAC86CE19757122341EE810B98D8C7762A1FFB97E45EB4CCB2E |
SSDEEP | 48:qG7HSL2GWTjQFDYdMF9BQsuZEG0FmfwlZjGlJse0lmfwlZjejn:LHSLdFF6ZEG0FmfwlAlJse0lmfwl8jn |
TLSH | T127614C835C6B3517AA58C83FD140A9F28C163ECA53549535701D77526FF8BC0DB2BA36 |
insert-timestamp | 1679425616.751348 |
source | RDS.db |
Key | Value |
---|---|
FileName | ./usr/share/doc/hmmer2/README.Debian |
FileSize | 615 |
MD5 | 8262C31C316EC6451B265A24CAFCD7B0 |
SHA-1 | 25DF7133140BA1E11447E40C066E31114C1625DA |
SHA-256 | 4FD234E169E6E7F0C8191650BC887D1FA2E1B0934E00364FCCEF9AE298A3170A |
SSDEEP | 12:1JnW9XD5EXdOflKcsMomfHqOJ+qSRAFxNJtwtEZUXQmG3nFa9Jqle7J4Be:1JnUX9+MdWMoeuGtVWAmYnFa6leN4k |
TLSH | T1FCF04740FD5B25901056D156F37D3DB3E707CC3F03E9A0B4AE040119E706159547F501 |