Key | Value |
---|---|
FileSize | 394216 |
MD5 | 6BAFDF5AB6A7A54FF2E8FE740AEE7E93 |
PackageDescription | QIIME 2 plugin to work with adapters in sequence data QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features: * Integrated and automatic tracking of data provenance * Semantic type system * Plugin system for extending microbiome analysis functionality * Support for multiple types of user interfaces (e.g. API, command line, graphical) . QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline. . QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed. . This package wraps the dada2 R package in BioConductor for modeling and correcting Illumina-sequenced amplicon errors. This was shown to improve the sensitivity of diversity analyses. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | q2-dada2 |
PackageSection | science |
PackageVersion | 2020.11.1-3 |
SHA-1 | 37FEA3FD6E76BD114CF20256E4A410F5C55B46AD |
SHA-256 | DAEBA909ACA8F7686033764E5B080277B818FFBC46C229FD36D466E7A718A81C |
hashlookup:children-total | 82 |
hashlookup:trust | 50 |
The searched file hash includes 82 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-default.tsv |
FileSize | 3577 |
MD5 | 935E9DAB387C83D9775020ED72B5FC8B |
SHA-1 | 007716307501BADF6244D6011AD71A4B1799FA70 |
SHA-256 | 836466AA2D585147C74781BFCA9303DE8409364AF506FB872F504CAA92EC80BB |
SSDEEP | 48:O2+/32rM6TBxCWAkGuhL2aeBYEyUG8+VMl3r3J2ZGd:8/GwsBx1AkGui2UleMlsZGd |
TLSH | T1A9710B3C7C511280D5A54C7B4BBEE56C2EADB1AB3945183D0843B1494D319EBEB6FC1E |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/underscore-samples-stats.tsv |
FileSize | 617 |
MD5 | CA473E4EF492F536D6AE04477E1FB76B |
SHA-1 | 09AC4FC339C0FC66438F0CC9E1C886DE8967BF54 |
SHA-256 | 6D4BFC705D39F0B55B4F8F023F56C752D63FCC9FCD285A211CB62C9D32146856 |
SSDEEP | 12:Y96qM/9e5q8UAU2Z4GH1NbEHdfQA/hdAK7QsTUj6x2KnB9p:r/9eRUAUeVNbs9ppdbx2KnPp |
TLSH | T190F0C8E81EE521806445D6D5D8F9F521A96EC3F34F4404AA24F4E77F39384835B90857 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_48_L001_R1_001.fastq.gz |
FileSize | 10459 |
MD5 | 83D82C8316C8B471D53655737A2D96F4 |
SHA-1 | 0E9DCCCA5F0C684B829ABC3145E1069521C5A38E |
SHA-256 | A1296DDDC10A0C4BD458A23039B1481384A9E8B5D31F71A0ABB6116032CEB46A |
SSDEEP | 192:cSI7OKmPWbGrpIikknCgznBjzbbyyZ79wqnyGUT52rvVijHpAwuOzNVat0SbPGQH:VI7Ort1nCuBjHbFxwqnyR92rvQDpAwuB |
TLSH | T1D122C0CFBBA138E42F17CA5B4854B4568D94BAFDB4E474F1339906C05930D95C036378 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_49_L001_R1_001.fastq.gz |
FileSize | 8598 |
MD5 | C0376727398EEC86B236FDE655397F44 |
SHA-1 | 0EB2AD3B14C03886A788E7725412481F96EBC65D |
SHA-256 | 45050A1A9FF358B1CABFB37D1D30CAB6EFEFEAE9F59C4B8CD0FDC4BA19126143 |
SSDEEP | 192:kzSwK3lxiEy3ZG6nJLDm5vdGBqnyub3C8+t3c12b:kuwqlcFz1K5vdIqn9b3bB12b |
TLSH | T122029F38720B168C52F1E55D6E6D288F9F5E65E2C98F7C5BD5CC9CC35C42D02A142519 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L3_S294_16_L001_R1_001.fastq.gz |
FileSize | 9807 |
MD5 | 44E32B25A9C06572A588E43BC7FB7682 |
SHA-1 | 0EE48A3F86C4E23FB98D1B95CE79E1211F37E1E1 |
SHA-256 | 580438C44B38F944674F3A3D520A2796DA60A3FC8D4DA0F404BDDB3EFD401F26 |
SSDEEP | 192:cZ/8p0/eUUSQsOkycbvQl6WbPduxGfUqeGqUbu6NuBwWpscKL:LWitC77WbAx1qeGqU5ufscKL |
TLSH | T1B312A057A3118D9AF0B36C9250ED4FA6EB43C6A05B44C5F15B9773D7602D64BC08833B |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1242.3_44_L001_R2_001.fastq.gz |
FileSize | 10966 |
MD5 | A6BD7DF1BFCC56D35645221F4DFE8F55 |
SHA-1 | 10EF909C6AC5A93560421AC4A0DA311DB673586A |
SHA-256 | 98F92AC3B21EEE75D6BF3CDFB4FF530634052BC475FD6DFEC84D958ED71A1445 |
SSDEEP | 192:6xCelNFp3YK3vlMtWxqrQX8G7bqwcQEwPo8Wi9GeYYeWWvT:6xCYv3YYvilcsm5ngVsG9r |
TLSH | T14132BFDA9DC151551FA80BEAEC80AD9573B3604B0B949BEF00FAAC47DD9D5C4701F923 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/qiime2/tests/__init__.py |
FileSize | 349 |
MD5 | 5C1644502AC3EEF809CA34678498F56C |
SHA-1 | 13DC9AF30FA94C6BD4143452FAFEF656380DD84F |
SHA-256 | 4A7CC4E361799142ED54F608427CD72D09FCE1EA5FEE0539CEA7A571EAD0C6F4 |
SSDEEP | 3:S1tSmOmDD95VKXrZuyhLeqXR2QEmJq5mzSAWzCkICXLjOSRgGWKwKRrMCNA+jn:S1tS3pbZurca+hcrMCNrjn |
TLSH | T117E02274BC882B334AC1CC838F8B41EFD31B043E26832C05708CC44C3619E60E4AC8C0 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/citations.bib |
FileSize | 397 |
MD5 | C94F1B193D079E217BA2E20F49871DBB |
SHA-1 | 1864B0A00FC208D32B46D42969FEB4D337329C2E |
SHA-256 | F1E37EE83C316A2DAFC51DEC845CCC08AE1BEAF44FA0A7766206D2659D3770BE |
SSDEEP | 6:Ur6je62QxeKpyaSvFmBkeTLAOMQWEO1KIcJiDeI0FuarVlHghYf:pe62QLplSzsACWH1KjCXqu8f |
TLSH | T1F1E0F10BBB6247D1B71E0BFD0EA4114198F380DB290679800560A384370D2B1357DF22 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/single_feature.tsv |
FileSize | 216 |
MD5 | ADC4193D29C68F2693BD180F6EC5B9D8 |
SHA-1 | 19492B8944D84BDCE6726F3B65F717E1036BE580 |
SHA-256 | 97DB1546AE525FE9E6224BFAAD5496DAD33D65DC2DFF4B57EA58E720A353BC6F |
SSDEEP | 6:TfIP3p2XMCueIjjsoWLkfp6FaUcFiJu0f/R5OW0nQF:TfIP52pIjHBceKf/R5OO |
TLSH | T193D012D42C67A240F4D40CB34C7D6620186CF197D548121E4D5B311A8D7AF47D3AB97D |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/PAP130.2_22_L001_R2_001.fastq.gz |
FileSize | 12137 |
MD5 | D68375000AC1091DE6E96F185C502433 |
SHA-1 | 1AA860723EA45CFC6C7BB3E9ED584F2203C2B802 |
SHA-256 | FE07B9A872666FE3A4460C2216FFBAD20ACF2243F2DC3EDAF61EEB3D0B4F0C98 |
SSDEEP | 192:JPCnPSImyvQPg2fsIEUcUHjtcFtBLvx6Gj1gY43dPnFuVBZKjvPxRrpsWjLNchY:onKIP+LscBjtcFf9jHMdPFujKDPjrpsI |
TLSH | T1DB42CF1C8E6089DE53E87E8032F7FB7D29DDADED5523885D58638A8141CA02DFEC504A |