Key | Value |
---|---|
FileSize | 2813308 |
MD5 | D33FC9FD4A787EAADB971243437F5F19 |
PackageDescription | efficient phylogenetic software by maximum likelihood IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others: . * A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014) |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | iqtree |
PackageSection | science |
PackageVersion | 1.6.12+dfsg-1build1 |
SHA-1 | 2CC0F84917A5D45CEDB1F78E8C2AB723DEBF61DC |
SHA-256 | D9778D6A8CFC19D64AC861A125CBD4884D4F52D99AAD23C39E7EECED47A22F01 |
hashlookup:children-total | 14 |
hashlookup:trust | 50 |
The searched file hash includes 14 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/run-unit-test |
FileSize | 2271 |
MD5 | 7E88C48674F56D170CA5504F71A8FD10 |
SHA-1 | AD1B1453A924E41463F5B778FF0ADCF8E026F995 |
SHA-256 | 0BD3BDDC9AF85F631357526CFA8A162DEE57E0DBB897CDA98D9455E12E94F98D |
SSDEEP | 48:WCdgCt/Oi65sBbk3/BisAhmEJ0WOcoHnKHXpXeX/3a5KI6VUfILUVTan:RgCt3Wyb4Zi5hmEJ0WOcoHnKHXpXH5KR |
TLSH | T15D41E4188348F0387402E65C65B931D246E9520DCFA49E6744C47A263CE8D9F77FB7E1 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-mpi.1.gz |
FileSize | 5918 |
MD5 | 8C70009FD486F5DC05E35CB856193528 |
SHA-1 | CDEC645079657D4693FCA7769A060CF748C31234 |
SHA-256 | 24DDF8C55E4540AF0E8783E352F71F32DBB29AD0357D19512F66EA0BB2360A44 |
SSDEEP | 96:Qb+BMGuODctOqa4AP3PDw6KK3RGafPimuQzU/19wQuYSco8urBK4lcjMuqoaE49j:Qb8Rlqta4AT713RpfPimuQIcQuYSXpBJ |
TLSH | T126C19F46AB84F6D91B287BC7C64309EE484AC626FD2403FF1DC1936DD1990B063E94F4 |
Key | Value |
---|---|
FileName | ./usr/share/doc/ncbi-epcr/README.test |
FileSize | 278 |
MD5 | 2DE4573BC735E689F789D7662AB0497B |
SHA-1 | 34200C528591A6F25552E67122DAA479F2C54753 |
SHA-256 | 661779DB6A77C9045E836BDFEBA7DFEC1A17CAF079E40B27E6E0C22242CB4312 |
SSDEEP | 3:OpKL62NMGlGmIRCvH7xd7777777777777777777777777777777777777TjvvlGr:OpK+2NHlGq7vlGkwyAK9EOMfyGYL6f |
TLSH | T1C8D0223712C688063100CC8E19898131E41DB02E723800C02928391C97CC8324943CB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/changelog.Debian.gz |
FileSize | 802 |
MD5 | B69E140B98008092A5850EA1B3A5B826 |
SHA-1 | 256A8E17926F5C634CD33C105A8862701B7ED9A8 |
SHA-256 | 65AF024F981724733A48824DF6D1B080EC6CAC6B6699E5731B83597905137F41 |
SSDEEP | 24:X+wmOdI3LH8wYbiH5mNtRjoMP34RZoDt87+gUC:XNmhH8+ZYR8MgRT7+W |
TLSH | T10201CA9033038CF59F3FDFC992FC8911E1E5A0619C6A8C8C3865E9103955419C54C3CC |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.nex |
FileSize | 174 |
MD5 | D064E66F36E2EFC6C441F46EA1E02BA6 |
SHA-1 | 701F6A74581E150712F7F87859DF282EABBCD885 |
SHA-256 | 359F1C6BDBAEA2AAFF49F233B9BA9AFECAD653AB68442775240E228A196EFF83 |
SSDEEP | 3:bDHMLsve0aEXWARFYWLwI4QWARFY6cDQWARFYwYaAlvvsGQVEXRQMkcPNl+Pc+MK:vJG0PB5EI4g2DgTbAlvvsNEXRQrcbN1K |
TLSH | T10EC08C124FA073D6180C8B271CAB0AACC86A1082A60BCCCC80B81CF530C3E010321FB8 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-omp |
FileSize | 5661568 |
MD5 | 102BBCAB50B66296AAAA9007D8AB0EE3 |
SHA-1 | F55552AF8E896E59C8872BD136512361390428FD |
SHA-256 | DB078A466E676C693EEA2EC5D2F70503364A7B056099AA7C6657E8C964F37DCA |
SSDEEP | 98304:Xi83LQ7CRQSdJKwofzqhLzFyg/wWsay7j1mNaj:G7uOJELY6y7j1Ya |
TLSH | T181467E4BF29228ACD08ED434579BA673A530787C41743A7A3A898F311F32FD45B7AB51 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-omp.1.gz |
FileSize | 5916 |
MD5 | 0983A548C642705546EA7A1D16CB914E |
SHA-1 | C55AFFB724EF016F96CFE9A1781E679F9F0AF3B4 |
SHA-256 | E0F3AFD48AC3A77663CF08CCE535553C666A082105FA1FA10F03A51037FE0E95 |
SSDEEP | 96:QbzSlXPNlgWxL3ZXSscoKOxw1LgxLlN04Du894ZGMmJid21u1xEnoDOKh0+vekAQ:QbAPvppw5OxcLc/u89CGMmA21ubEnOPd |
TLSH | T1B4C19FAD7EB45FF5C1535F9E3459F503A804F20EF4A4D0465C09680191E468F3778F4A |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-mpi |
FileSize | 5763968 |
MD5 | AB16D6F10B887E05A6A086625CF934DB |
SHA-1 | FB3B31D48399A6DD87883E477F0C5466AB1C9F05 |
SHA-256 | 656CCAB658F355CC3CDB47635D62A91A26931300198C417DD2384FEF847AE3D8 |
SSDEEP | 98304:pIrUMDaOFCbZ+QexmDOLQ8XHYochB2f5:qpZGKYochYf |
TLSH | T136467E4BF29228ACD08BD4345797A673A530787C41743A7A3A888F311F72FE45B7AB51 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/models.nex |
FileSize | 121669 |
MD5 | 4DBDA2CFCACCB91848FBB78BC9A23607 |
SHA-1 | 94C9995EF4E7692E8C052885AF09709A1385D47D |
SHA-256 | 2645E5906033FE9AE0DEB0C9A2598B296330A5BA7D618785BB3F59CD8BCA2DA0 |
SSDEEP | 1536:k7LAbp0yi/x91aBNIc7NmJiTA+nJ3jqA5Kxq1zX37R2zkjsKvshyGn8Y+2kyQgdA:Qk |
TLSH | T112C300F94E8460D0BC0EED68CD3B55B5E00778B73EF1D0C929AAC45AD522AD98F2CE45 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree.1.gz |
FileSize | 5897 |
MD5 | 8EFBA7EAC07D41CBA9FC6327D34D9244 |
SHA-1 | E8E2DA59DDACE16A040E5E95CFC5CF8CA5DE9A9C |
SHA-256 | 2D4F1C4514A0D5E725B99677855A0B4DE5643DE3580F8DF5F69885467FB371EC |
SSDEEP | 96:QbbPFr+b9ni3CD6mjRqafwige6LMtjDAh5YhYAAHdAo13u7gcF7/Cm2qWDAK:Qbb5ih6ORFfwig7w5DAh5KBN7gcp/qq8 |
TLSH | T1D9C19F4CBE30AF59DB94AA2A39F928E9CC990060555D48036DDFA7BFD003536127F1BC |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.cf |
FileSize | 2237314 |
MD5 | B8F84490874605668A13B246DFC08B58 |
SHA-1 | 3BA6EF7FFF1FD6F23D3F6C9C956464C9ED479855 |
SHA-256 | 9E41FAAEA1C845B0C3A2E2F87A41E12966C26C1383382A98D3585FFE1DA515DD |
SSDEEP | 6144:8pK91GwPxNWUXSPMMoXg96JcDM1t70GmrEz4+C5T11HXPGFEq2WEn3FN3l7YukPR:DXco |
TLSH | T178A52DF01FD176C070544BCBDD25EB0D1AE2E62A3542499DDB16988B1E30DB722B89BF |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree |
FileSize | 5661568 |
MD5 | 3F82334C9265254E2736A7C80CCFE59C |
SHA-1 | 475B0F5E8DFAF14EAA38D938B9D32067E212AB59 |
SHA-256 | 524B91D55BB0CCBC6B75547A33E1F1BC2097108F79CEC9F9E302DA25D6C25876 |
SSDEEP | 98304:5y83LQ7CRQSdJKwofzqhLzFyg/wWsay7j1mNaj:s7uOJELY6y7j1Ya |
TLSH | T1C9467E4BF29228ACD08ED434579BA673A530787C41743A7A3A898F311F32FD45B7AB51 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.phy |
FileSize | 34178 |
MD5 | 07FC2F082A71084BA30F302D35091278 |
SHA-1 | E1FE105B685D31377D8E4C41034D46CAE8DD8790 |
SHA-256 | D3365CBEA79AB6D7B184D1BD9153871616041C6E0E8E591D2A0B4BD08DC0B9BF |
SSDEEP | 768:iU0RO4sQvhu77D3dqSm6KbLu3p44g5dBHdvY:AR9sEh8D4tLu5XyhA |
TLSH | T1BEE2E9B4A3A03D78734708870DBD73C14CF46D7F4E57AB222EE1271B0A34962E96A957 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/copyright |
FileSize | 7971 |
MD5 | 68D1E206102D7159F1073BDBCE5A9DB9 |
SHA-1 | 35928699B5928C497D60DD90F05237AEC612E599 |
SHA-256 | 82A7D998755F13F088002CD23D8C400023C0BFC572F360C9C2DBE24463D8D737 |
SSDEEP | 192:HBuMzs+EaI0mMkMV5y8Ezs3LshgXTxs2F3n:HBuMzs+E1bOV5Czs3LshYTxs2F3 |
TLSH | T1ECF109483140C7B7A1C033C26C966ED5E32BE7E772B94E81345DC25E5B1692E12FA8F4 |