Key | Value |
---|---|
CRC32 | C032441A |
FileName | 46091 |
FileSize | 34264 |
MD5 | 42184C072E9103F815770EE25A35334D |
OpSystemCode | {'MfgCode': '1006', 'OpSystemCode': '362', 'OpSystemName': 'TBD', 'OpSystemVersion': 'none'} |
PackageDescription | map Pacific Biosciences reads to reference DNA sequences (Python2) pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. . pbalign is part of the SMRTAnalysis suite. This package provides the Python library backend. |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | python-pbalign |
PackageSection | python |
PackageVersion | 0.2.0-1 |
ProductCode | {'ApplicationType': 'Operating System', 'Language': 'English', 'MfgCode': '1722', 'OpSystemCode': '914', 'ProductCode': '184818', 'ProductName': 'Linux Mint Disc 10', 'ProductVersion': '18.1'} |
RDS:package_id | 184818 |
SHA-1 | 2768F22A70A8959550C9253048FEFA067357C036 |
SHA-256 | D6F6DC1F85464ED189761C0CDFADDDC41CB51E8D132CDE47AECF035453706672 |
SpecialCode | |
db | nsrl_legacy |
insert-timestamp | 1648755537.49453 |
source | RDS_2022.03.1_legacy.db |
hashlookup:children-total | 34 |
hashlookup:trust | 50 |
The searched file hash includes 34 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/alignservice/bowtie.py |
FileSize | 10869 |
MD5 | 8921166CAB55FDAF843C508D641D1985 |
RDS:package_id | 184818 |
SHA-1 | 00A55ECBDAF006C2B88841105EA7AC1B36D1016F |
SHA-256 | 97ECFE51CF281011F3686D50DEB1C9D50FD7BFA2BCA9C7D7A1920FB055B601A4 |
SSDEEP | 96:2g9rYJ2rYJM4tDFAt3S/pisCtya6/1SkmMJxkuFwyje1lC4J6vHE6hYY:X9rs2rsfDFw3kAsAF6dSkfCdH1l5J6vd |
TLSH | T1AE22841BCA0A1BA19BC369A117D2E6416134A6271C777430389C92EC3F41829F2F72F6 |
insert-timestamp | 1648769986.4174492 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/pbalignfiles.py |
FileSize | 8984 |
MD5 | 7036A6A23576E26F06564F17BAD9FE19 |
RDS:package_id | 184818 |
SHA-1 | 0337EE6C68F27746EFE9B27A500897F77AC2F58E |
SHA-256 | 5D1EA7205E29BC286A885752183C7CA94529CFCE6FB75BE6B99956E993690CBA |
SSDEEP | 192:X9rs2rsfDFw3kA6wNUekuA2JM2xfNpdClGhnRCtTSNvNLN4NHObpT/j5r9NvoM7Y:Nrs2rsfkkJWUTu3eufjdClGhRuUVJ+HL |
TLSH | T14D02530F47024AA5D723455562E7F6872A1E602F2D371961B8FC928C3F02EE172E2EE5 |
insert-timestamp | 1648769986.3372564 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/alignservice/align.py |
FileSize | 8876 |
MD5 | 2E1D4090196395978574F6FF9DB082EF |
RDS:package_id | 184818 |
SHA-1 | 0F7C5120A19DB2FDB1E88AA64B545246D95AF497 |
SHA-256 | 81AFC79BDA931C7ED90C541559BB92AAF1FCC10BDCEC070399BA8902E55EE6D2 |
SSDEEP | 192:X9rs2rsfDFw3kAj/+u4rD39i+2S6uny6x4s:Nrs2rsfkkq/oNQSy4 |
TLSH | T15F02754B4A450FE383C795A32653B042292AD51B2DBB242138FD975C3F52629F3E2EE5 |
insert-timestamp | 1648769986.4154167 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/tools/__init__.py |
FileSize | 1953 |
MD5 | C499C2A0BBB0204281C6D74A2C63B953 |
RDS:package_id | 184818 |
SHA-1 | 12C520B7BF0EBF322D58D0E7CACED0D8909891AF |
SHA-256 | C206FFCCFD8D6D995A53246BAC3AAD349020667F1F2C4CFCD01E9D6880EE89F9 |
SSDEEP | 48:2NO9rYJ2rYJ9ex6rtHjO4sMw5t32sWEtV1GtLiHeGAS:2g9rYJ2rYJM4tDFAt3S/pixL |
TLSH | T15E41A787528017B247E2479162EAFFC0B18A803D3F23BE0518ACF3845B6B52EE577595 |
insert-timestamp | 1648769986.3858578 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/share/doc/python-pbalign/changelog.Debian.gz |
FileSize | 154 |
MD5 | 6D4A95F61248CCE81105B3479B08F034 |
RDS:package_id | 184818 |
SHA-1 | 24C0A9D1D9DA846644AB4844014FCD9C3808F369 |
SHA-256 | 4801494A9486ABC1AD8C9925FB653E339D0005CBE8CF4207166929BB609B4D89 |
SSDEEP | 3:FttfoHhM0v8HgFl2xxotD8B/uwd+KUlkiFVePZxWBj18tn:XtfAhM0veg6TuYB/uU+7lrF8PPGJU |
TLSH | T13CC02457DD447053F553513D0714173C7505DDF1D1347F15115D1177303444155D011D |
insert-timestamp | 1648769986.9941647 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/pbalignrunner.py |
FileSize | 12641 |
MD5 | 140E8CC6497297A789CBA6575E09E2A2 |
RDS:package_id | 184818 |
SHA-1 | 2AC3594D400DBD94E7EE78E1E2F48BFA2487E2DA |
SHA-256 | E80C659FFEB1FAC6F00C1F99C2ACD53515B64C87D6C8F34BDE2A1567DBC4C4A7 |
SSDEEP | 384:Nrs2rsfkkguvdFtU5EVUEvNurTIGUQ5w95NJ:NxdkDvdFtUPkf |
TLSH | T1B742A81B8E8609F1C34754361DA775422F7A541B1CAB243039FC931C7FA996DA2E2EE8 |
insert-timestamp | 1648769986.3838744 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/utils/fileutil.py |
FileSize | 15061 |
MD5 | 09F42E3C9B899DBE0F14A34E29421098 |
RDS:package_id | 184818 |
SHA-1 | 37A6660FE0AE4AE7D751770E89BDADB1A230782F |
SHA-256 | 9128FAC68EC4573D96660A372F00C98A78D47A063CC645D2C51814981B49833B |
SSDEEP | 384:Nrs2rsfkkjfwMRNvW87n8IRXiNRCklUvmeULu0z9qpT2m9zmrWxGCYVOlVhVJyGn:NxdkslDU6SsCYVXC |
TLSH | T11362515ACD4208B5C72382295AD3F54A7A1444BB1C3B6A3178AC40BC7F26A7465F2AFD |
insert-timestamp | 1648769986.3442173 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/service.py |
FileSize | 3147 |
MD5 | 8AEC3525E3E5FBA7ABB7B9B0DF21BC4F |
RDS:package_id | 184818 |
SHA-1 | 3AEB651F4763E74DDFE84CC235BF3E2E12315DED |
SHA-256 | FC1CB3F152C2B79D776244E8C3DDBDD57C30A0858E72C3BE6423732C12F093C4 |
SSDEEP | 48:2NO9rYJ2rYJ9ex6rtHjO4sMw5t32sWEtV1GtLiHJMKxPOLp6SpLPeSphI:2g9rYJ2rYJM4tDFAt3S/pir6y |
TLSH | T10A51A58BDA84CFA22382866925537EC0730E501F2E3B68127DFDA2086F66D1EC43D569 |
insert-timestamp | 1648769986.4179726 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/alignservice/blasr.py |
FileSize | 12863 |
MD5 | CCCCD3B15DB5EC54C01DEC3F91DE06D0 |
RDS:package_id | 184818 |
SHA-1 | 3B894DB716481E879087E23297700C0F45FA4E49 |
SHA-256 | DA52545C5C9B0250A02674B57CFEC4F280E314C6F25828B42D6397AA77659ECB |
SSDEEP | 192:X9rs2rsfDFw3kAuNtiLoJjitILE70DhNWs:Nrs2rsfkkFcoJjitILE70DDz |
TLSH | T14D42410BCA061795E7C761A15EC7D0006234F62B9E2BB9347CAD93CC3F4985AE2F3295 |
insert-timestamp | 1648769986.4164996 |
source | RDS_2022.03.1_legacy.db |
Key | Value |
---|---|
FileName | ./usr/lib/python2.7/dist-packages/pbalign/tools/createChemistryHeader.py |
FileSize | 6934 |
MD5 | 104FC1354C7548162EECFFA202F08CC8 |
RDS:package_id | 184818 |
SHA-1 | 46FC009D7546004C7F1116A121CABB2B71FCAA7C |
SHA-256 | C95F5F8297FBC616D1AAEB17EDE8471DBCD5CCC8FF020314498C384FB2697588 |
SSDEEP | 192:58qiMrS8V/b8POqscltzJAHv3NAo9H66tf+4XFSRJm+sknO8M:58qiMrS7rzJAHv3NAodVEbY |
TLSH | T1AAE1751BDC4C2E4953C3455C48DFA908677C90270A0280B5B9DC93BD2FE4DA5E3FB6AA |
insert-timestamp | 1648769986.3874943 |
source | RDS_2022.03.1_legacy.db |