Result for 261216A3D2DF6D6E428F7E626637C72F3C020474

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Children (15)

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Key Value
FileSize2189752
MD5BF1377F616AD0AF51A3B2687DCD3B8A8
PackageDescriptionTop-down proteoform identification and characterization (programs) The TopPIC Suite consists of four software tools for the interpretation of top-down mass spectrometry data: TopFD, TopPIC, TopMG, and TopDiff. . -TopFD (Top-down mass spectral Feature Detection) is a software tool for top-down spectral deconvolution and a successor to MS-Deconv. It groups top-down spectral peaks into isotopomer envelopes and converts isotopomer envelopes to monoisotopic neutral masses. In addition, it extracts proteoform features from LC-MS or CE-MS data. . -TopPIC (Top-down mass spectrometry based Proteoform Identification and Characterization) identifies and characterizes proteoforms at the proteome level by searching top-down tandem mass spectra against a protein sequence database. TopPIC is a successor to MS-Align+. It efficiently identifies proteoforms with unexpected alterations, such as mutations and post-translational modifications (PTMs), accurately estimates the statistical significance of identifications, and characterizes reported proteoforms with unknown mass shifts. It uses several techniques, such as indexes, spectral alignment, generation function methods, and the modification identification score (MIScore), to increase the speed, sensitivity, and accuracy. . -TopMG (Top-down mass spectrometry based proteoform identification using Mass Graphs) is a software tool for identifying ultra-modified proteoforms by searching top-down tandem mass spectra against a protein sequence database. It is capable of identifying proteoforms with multiple variable PTMs and unexpected alterations, such as histone proteoforms and phosphorylated ones. It uses mass graphs, which efficiently represent candidate proteoforms with multiple variable PTMs, to increase the speed and sensitivity in proteoform identification. In addition, approximate spectrum-based filtering methods are employed for protein sequence filtering, and a Markov chain Monte Carlo method (TopMCMC) is used for estimating the statistical significance of identifications. . -TopDiff (Top-down mass spectrometry-based identification of Differentially expressed proteoforms) compares the abundances of proteoforms and finds differentially expressed proteoforms by using identifications of top-down mass spectrometry data of several protein samples.
PackageMaintainerThe Debichem Group <debichem-devel@lists.alioth.debian.org>
PackageNametoppic
PackageSectionscience
PackageVersion1.3.0+dfsg1-4+b1
SHA-1261216A3D2DF6D6E428F7E626637C72F3C020474
SHA-256EE6CBD72541FB0B4E78FF32906FBF57F0FE31E2250C6DCA145A21CB532FA61AD
hashlookup:children-total15
hashlookup:trust50

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Children (Total: 15)

The searched file hash includes 15 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/man/man1/topfd.1.gz
FileSize1782
MD50F1ACE6CE2995E873451A8C2898E075C
SHA-1F04FD48BC3BAA084611E86DC26AE4B48BE44F274
SHA-256B329D87F5B90C41E97EC98D417CDFF48C0F7CB3237F4F968B4396B3D3220326C
SSDEEP48:X8EYTifWKUlTXI0B82L44MYsGM0I0Ta9Aul:sEYTi3Ulc0K2hsGMgTaey
TLSHT1CE314B0CDE196BA4CCF50D6B332051100693BF723285C136BE366B80498561242C8D67
Key Value
FileName./usr/bin/topdiff_gui
FileSize2689536
MD5727659B1740F14A5D207890C177126C4
SHA-18F44AAFAC667FADC3C57A3A6FB70110E49DA70DA
SHA-256BFBDEE6D034B94444336C65426698F9EA61906FFF79E005CA2AF51B43D687D0D
SSDEEP24576:cfqV8OczB5Cv1ad4+GhSa/pCNlWWhf8N5rJ/pV0Wt:TV85znGD+Gwas3CHu
TLSHT17CC51907314C9A52CF4679BB228FE650714637E5052447167A81F34FEFAEA078B2AF4E
Key Value
FileName./usr/bin/topfd
FileSize1903104
MD5AB2DE52C703570542AF9657DE4321CCE
SHA-15D7A1B6560F26D98990BB6474E667B33D9406A7A
SHA-25625CF92BF37711C69A44034BAB31B4B4CF041FB5C34C275C57E3B72815A9B62FE
SSDEEP12288:g5PDNtrx4wy1PwV4fsvggirbiz6ggJ91OaMg6f/8JboKqCqFuY+8ZUYM8ldttEVz:g5PDafwzYytREq2GGQeDmanb
TLSHT193952A07364C9A92CF0579BB228FA650714A36D51514471A7984F30FEF9EE03CB6BB8E
Key Value
FileName./usr/bin/toppic
FileSize4000264
MD50895200B1FBB68531A704C8A7E86449E
SHA-1FBCA3504CB514A2EA676CC90ADE54C5491A8F8C5
SHA-256557B1FCEA5EA1F8EAC89AAC857CA2FC12059A274D73ABA6F4016AFBD80A4AB23
SSDEEP24576:RFrMZ8ruFXQnslpO3ryfEEKzj0Q/QCCm3u8v5jx4N96LGiSZ0Js/HSUU1OY:RFs8r2tieEj0Q/tle85x4L6LGlTjQO
TLSHT1E2061947314D9A46CF05BDBB228FA650714936E4092447167A84F34FFF6EA038B67B8E
Key Value
FileName./usr/share/man/man1/topmg.1.gz
FileSize3535
MD547CEEA9F6884D8FCACB81BEE2B3A5B99
SHA-13E15EE2D09377935673E9F74002F8FCD0EDCC582
SHA-2565C3CCDF8A89CF090B8E3309981E2B687E2CCB5EBF4346DD2724CC2E8C0266FEE
SSDEEP96:cPBsgiFqqjLokIooEdVWGAPUJNi2q7OmgSeycmt:EUFZj/IAW93/tghmt
TLSHT121716EC29EC1A8E2D7AEE94136E2ADF7C5504743D14C7DE567B082912323BCA459F05C
Key Value
FileName./usr/share/doc/toppic/README.Debian
FileSize395
MD59F1BE0E5BC01366624E688E7A6289E9D
SHA-12A85C921E54A42617DD7AE8CEFBEFECEA0ECE908
SHA-25615B781A7178B651A4AE147E3BC4C42F56C13AF7D7E7EB12803043BDE448FCC2D
SSDEEP6:GLxN82GHe1RvA75fKSMlGde/Ap2dZII1Sx4cXUVEC8FQ6N48ZiaGpcEBNg7HIv:EN8wc5jMlGdfMPcSEA6+1BNkHS
TLSHT1C0E0F1F30393B7233CF14AA9510C31849F1B18D4613722B408544C16E207812B2826F3
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.gz
FileSize642
MD5F0B28350E1E2A694631799991576927A
SHA-100E8DFADFABD41BF89D5AB55A041C881CCE06D66
SHA-256564B1C505C6FEE8F67AE0B48AA02ED972884C31677511AD374AE0C308769CC30
SSDEEP12:XgxQwifeaD1jTjpo+Vo3KCDl0ZyuIQY1XBeXgVMleVFz4X6LS5n9eN:XgxEfea5jTVw3KCDiZ6TRsXGMM34Xv5U
TLSHT102F068E37158A0CC89ADC2F57ED4509D0F6EC37F1C44090351E5464A71B4C9A661CB53
Key Value
FileName./usr/share/man/man1/topdiff.1.gz
FileSize1427
MD58508CB11FB0062732D842992C0F5103F
SHA-1BDE443625DCA168A2E7B457750FF4A3B42BA6CB5
SHA-2564451147E24F8EB7B0C1796C7D247615230DB170690A00B5E9D89099FB0896A9E
SSDEEP24:XDTVR9+7cKMqh7f4W6vUqXBZz8zqz1RUWBoyg5mnfw9Qnt/9RqJEvlwCEIs9R:XXKjhz4/XBZzj1ewo6ptSJEvyF9R
TLSHT1FB21C93C294C4A39CFDFE655292101AD9611A40492A1366EB509C5F0CF663BCA679573
Key Value
FileName./usr/share/doc/toppic/copyright
FileSize11547
MD544023D008A494F53E0A77BF27858AD33
SHA-104B3862797896C9D46DEC86867C000B36D5CEB17
SHA-2566A4EF227AE9B870F453F68F6BCCE2490EBC0969509B74B3E63E4F999AD8FDFF9
SSDEEP192:3mD8TPzHbvt6DeOXQH+TQHanHmTQrs6r1P3H3JajmbM2IOrXijoLt3i73hU9pjSK:3+8TP/vQDnXrT5kQrsINXJMmbfPrSjAz
TLSHT11832C71EBDC00B7309DC1AD2BA1D64C9B12AA41F7A668ACC645EF2150BB741DC0F6377
Key Value
FileName./usr/bin/toppic_gui
FileSize4131336
MD5A0396D5B7F4D9E55FFEEC25D98BA51E0
SHA-1BC42E8484B8A3D59C1D85756B94697D7FC81C665
SHA-256EF0AB665A7BAFE2DBDB4AC994A3064EA84B1C7DD51E363436FAB1C1BACD649E5
SSDEEP49152:Ow/yos+3Rrq8++2jnygJR0LEkveugqoJ7:Ow/y+382/gqoJ
TLSHT1CE162947314C9A46CF05BDBB228FB650754A32E4052447167A94F34FFF6EA078B2AB4E
Key Value
FileName./usr/share/man/man1/toppic.1.gz
FileSize3706
MD551FBC0160B68799D7D6FA1F9C9BA1936
SHA-1A927CC04971DBEACBCE28ADBE20D876068D9198D
SHA-2566C5B9F79EB72EBC28F8317179A26C058F199DCF8FB90D53E78B12625714D2A6B
SSDEEP96:B6xe0FBZWYnxj6r1hIL0tVjjhhetKLb00leq:B6xBnZWYU1hKymULb00Mq
TLSHT153717EAD3A874C40D25FB2CAC0C7A912EB36C20FCDE8F8F5255E75353159B541205999
Key Value
FileName./usr/share/doc/toppic/changelog.Debian.ppc64el.gz
FileSize225
MD51364FFD2A895159A9C28BD4D094BCCB7
SHA-13059C3877F3763562F08BEB3F7802CF9641D23BA
SHA-2561C9040BFC248717E922668F12D9EAC89AF6FD34F29C70E4E38C0E0E6E2622E23
SSDEEP6:Xtfy2gUB9XCYiw/yeQSALS1mzlU52PaCr0+CE:XRBLB9dlQS4Zc2X0+CE
TLSHT167D097020E20422C9C0831B90EC44A25F0C06451B61B3708CEF66900AC6B2243194824
Key Value
FileName./usr/bin/topdiff
FileSize2624000
MD5EC7888BE0BAC1E54953BB1A142665AFA
SHA-1B5D9108C5FEAD22E706086E63AA83EC5656DF387
SHA-2562D6C00AABBB34B104BB6EC78E00BDE6803B154BBD2EA4AE3E1E3156EF6776555
SSDEEP24576:nrm/zG2K2EcWbkCF0LpXX1rch0Fe3zx6L:nr4tKwro0tVe3d
TLSHT1FCC52907314C9A52CF0579BB238FA650718A36D5052447167A85F34FEFAEA078B2BF4E
Key Value
FileName./usr/bin/topmg_gui
FileSize4196872
MD5C0DF66D1DD3F184CCBABD7E5FDF30F99
SHA-15A5A40C1C97973D22E30EBD75F2289254679903C
SHA-256912DD2E3868968DD895C13C1849CB978DEF09400B5B0C17B3B417F14926E795A
SSDEEP49152:a/eRGVY5TJV6Jhp2A7jbs9qZqbvnOHFF:a/NVLXjwL/OHFF
TLSHT15E162957314C9A56CF057DBB228FA650B14A36E4052447167A84F34FFF6EA038F2AB4E
Key Value
FileName./usr/bin/topmg
FileSize4065800
MD5847ECA30788C8FEFF873D07BE5CAEC7E
SHA-116B72A6EC2131C7A55AB500AF37C0058CA7A33BC
SHA-256C41081EF50AD55C9E3BDF9393B00F78FB0144F390A39F2FA30DA1BE3A7AE53C9
SSDEEP24576:w7BZOccxzWhbJvWBgcAxjcPujBhD/P8AV2vYisRPjqNiH50qEN/4nZcVduRClz8:EBZTcxqlooNhD/0TvzslWNiZ0qVoduE
TLSHT13A162A07314D9A46CF05BDBB228FA650754A36E4052847167A84F34FFF6EE038B66B4E





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