Key | Value |
---|---|
FileSize | 2503720 |
MD5 | 7BCC164ED0CF2C16AD9B01C6C865D6EC |
PackageDescription | efficient phylogenetic software by maximum likelihood IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others: . * A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014) |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | iqtree |
PackageSection | science |
PackageVersion | 1.6.1+dfsg-1 |
SHA-1 | 24A7EB8023F2F20ED25E517892CA189018B1E37D |
SHA-256 | 648A9940CFB9DE3A20DDE5B0F5B3A32C82ED3F2CA1A0BA69C8C7730BED9990FD |
hashlookup:children-total | 14 |
hashlookup:trust | 50 |
The searched file hash includes 14 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-mpi.1.gz |
FileSize | 905 |
MD5 | B25BEE10F7F41D6D484E04A4557E2B7B |
SHA-1 | 5CAFCC6E94C947222C0572A700C758FCC4FD7FC2 |
SHA-256 | 6B25B282D8C30BB2F3959CB79274782CC137ABFA65EF7A05A029724EBDBF73FB |
SSDEEP | 24:XI9z1LrSas4MAWon92rM8RvqDQGrlFU48tMRFg:XIV1LrpZDWq94PgJrrZkMRFg |
TLSH | T17611675FA4D143A75D86D64C34742C0B8A99A02729226B49A91E0A143A9DFA1481626E |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/models.nex.gz |
FileSize | 50589 |
MD5 | 92CB38E853A235C3804732DCA63AF996 |
SHA-1 | 2CA1103FB8EF8503ACC923350076CCA25AE1B66F |
SHA-256 | 146C3ECF29E4CD29407B925D313BC24DC6E251D11E258C4F1EEB409F2CF800E6 |
SSDEEP | 1536:Edy7djgVw/NV4cIL+I+J+tFpHzMcaIk/1PBsa:EdVVw/NV5GCMrmIUJea |
TLSH | T1EE3301C8456103B2D1FDE8B77C36038829F5B2A92EF9BBA2F131C1135EC4E54B615C5A |
Key | Value |
---|---|
FileName | ./usr/share/doc/ncbi-epcr/README.test |
FileSize | 278 |
MD5 | 2DE4573BC735E689F789D7662AB0497B |
SHA-1 | 34200C528591A6F25552E67122DAA479F2C54753 |
SHA-256 | 661779DB6A77C9045E836BDFEBA7DFEC1A17CAF079E40B27E6E0C22242CB4312 |
SSDEEP | 3:OpKL62NMGlGmIRCvH7xd7777777777777777777777777777777777777TjvvlGr:OpK+2NHlGq7vlGkwyAK9EOMfyGYL6f |
TLSH | T1C8D0223712C688063100CC8E19898131E41DB02E723800C02928391C97CC8324943CB8 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-omp |
FileSize | 4680116 |
MD5 | 65AD3C0F7505EB7AEB78E8266ED34ADD |
SHA-1 | 45F175D4D69F67987E2A828BBE9F67E85A0AE32B |
SHA-256 | 81653CAE7031BB0E584F57B34D47839AF787DA178F9B3624ADA1D4EE7CFA7EB0 |
SSDEEP | 98304:bvNyKNrvyK6LCKjouwFskkmAow8kRqLBMeUP1lz++Pf/45g4MZkB9dJ1ro:7NyKNrvyK6LCK0sEAow8kRqLBMRP1lze |
TLSH | T164266C86DB62F4B1F25344F01707ABB318103731A097D0B2FA89AE5DBA711E1E719B67 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.phy.gz |
FileSize | 8098 |
MD5 | 789D2B0EC8B665A90E647F108FD02FD9 |
SHA-1 | 5DA9B670104C9230C5379E60E2BB58EA400CE6F3 |
SHA-256 | BB9DCEC98F38D9FF9D0978CCC6A54B8CD53B230A3983212D6A589095486C0FFD |
SSDEEP | 192:VbpqbtksNuBWxTcpkcngvh0ZV9OEwUoR2NEv/FAzxuqEM:VFqbSsNuBgcgvgV4Uo1VAzdEM |
TLSH | T1CEF1BF8C08F5D902B111E8C68F713ED5DD9D9404C709E3E2A4C8A95F1EC43BCCA948A2 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.nex |
FileSize | 174 |
MD5 | D064E66F36E2EFC6C441F46EA1E02BA6 |
SHA-1 | 701F6A74581E150712F7F87859DF282EABBCD885 |
SHA-256 | 359F1C6BDBAEA2AAFF49F233B9BA9AFECAD653AB68442775240E228A196EFF83 |
SSDEEP | 3:bDHMLsve0aEXWARFYWLwI4QWARFY6cDQWARFYwYaAlvvsGQVEXRQMkcPNl+Pc+MK:vJG0PB5EI4g2DgTbAlvvsNEXRQrcbN1K |
TLSH | T10EC08C124FA073D6180C8B271CAB0AACC86A1082A60BCCCC80B81CF530C3E010321FB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/changelog.Debian.gz |
FileSize | 1039 |
MD5 | 453D3CEBCA4EB584EC45FD3005F89124 |
SHA-1 | 718A739DFE6913677F600A363CF70C6E61ADAB69 |
SHA-256 | D6FC54303216756749A70FF96F647B3B23C9571411191D4C793F31FCE69E1CA5 |
SSDEEP | 24:XzdzOPg3zFUSqQhM3TGnEQwH81LjFZUs49+:XzdzOPGySxUTwEQwc1LfUs49+ |
TLSH | T18C11D8C220628C25F04D007485CADAAEE58E481C97FCDCBF9825284E92A701BC25149A |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree |
FileSize | 4680116 |
MD5 | 791F4B8F8524B82F6D532F41FABFFF94 |
SHA-1 | E6EA85B32F51AF921482EB7867F4FC03F3671F41 |
SHA-256 | 244332D36521B4C45B768B5DB645F34870194ACA52A54E0A9199D7F8D5196789 |
SSDEEP | 98304:9vNyKNrvyK6LCKjouwFskkmAow8kRqLBMeUP1lz++Pf/45g4MZkB9dJ1ro:1NyKNrvyK6LCK0sEAow8kRqLBMRP1lze |
TLSH | T1C4266C86DB62F4B1F25344F01707ABB318103731A097D0B2FA89AE5DBA711E1E719B67 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree.1.gz |
FileSize | 5773 |
MD5 | 5682EEC06112B688E3ECBA3DAD62246B |
SHA-1 | EAA8397A34BCD057D971947D68E51F71382EE37D |
SHA-256 | 60C6FB24B738CAEFEFF62D26A28AA00F34C9822211F3C544D24B0702CEC25879 |
SSDEEP | 96:5vnM6WP3DRT86EUXBG3MQ6cRlKM5kvDSRLwKl3sWviI4zpZ9vLA6+Rm7a5LQ:1M6WP3DRnEUxG3X6qKRDSNw43sWqI4VP |
TLSH | T1B1C16D4ED286FE89BE1E8837BB4206F18FAC401252218EF1EF0DE684946E7F1B904057 |
Key | Value |
---|---|
FileName | ./usr/share/man/man1/iqtree-omp.1.gz |
FileSize | 5795 |
MD5 | EFAA613D34697A26EE2B7C0B8E2CD1AE |
SHA-1 | 3F6EB7FB21443CEECCCCC0E57BE2AFB6E5E91A85 |
SHA-256 | B85FB0781BE50127B0E6DE9250AFC1ACC89D8E4A963C817B7CC44933B002555A |
SSDEEP | 96:50LhjbaCKjepzp6PyCqZLPNXuUjBWx1xyHkctWKep/2v2G2fvZHUd4uz4+5g30:CdKCfQPa1PbBm1xUHWKBvfkZHqM+540 |
TLSH | T170C19E64C27902EDAAA7CCEB2B69B4106681FBBE072141638E4C3F2FC4896F52925543 |
Key | Value |
---|---|
FileName | ./usr/bin/iqtree-mpi |
FileSize | 4790708 |
MD5 | BE6198B83887E92264105D2A42F5E8C8 |
SHA-1 | F8CE6956410423B7F3B82B9E7A2D42C1D988EF38 |
SHA-256 | 12BA548F175F254BEBB360BE6C6E14444DA001662876899228C5B870448A3CA7 |
SSDEEP | 98304:Iwg0fx/YoKfikqDfmp8Ydwgy92hXIgWTchv3tfxw6tB6YFALRXF5c0fjV:Q0fx/YoKfikqDfmXwgy92hXIgWTchvdD |
TLSH | T14C266C8ADB52F4B1F16344F00307ABB358103731A097D0A6FA89AF5DB6711E1EA19B77 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/examples/example.cf.gz |
FileSize | 114490 |
MD5 | A38EB3E6B9B66F70805442FD99021ABC |
SHA-1 | 175C32E31F53AD71EA4C4CC58A8A3E41CD8552D5 |
SHA-256 | 6BF576498591D22F498567C7D59D07416CA92C5366EF2E085D56DF3A78AB6DC9 |
SSDEEP | 3072:cHYgzQ3dPW1Suu/2M4Dv6TWMXL5FfQIf901GxDgx1QrfIXx09AEy60GO:0zQNiDu/2M4DvAd7QRx15fp |
TLSH | T182B3127D04B95D1EFD87CAC9C086E647AA1234C9C7CDA466E4D142CF88076329EA58FE |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/copyright |
FileSize | 7971 |
MD5 | 68D1E206102D7159F1073BDBCE5A9DB9 |
SHA-1 | 35928699B5928C497D60DD90F05237AEC612E599 |
SHA-256 | 82A7D998755F13F088002CD23D8C400023C0BFC572F360C9C2DBE24463D8D737 |
SSDEEP | 192:HBuMzs+EaI0mMkMV5y8Ezs3LshgXTxs2F3n:HBuMzs+E1bOV5Czs3LshYTxs2F3 |
TLSH | T1ECF109483140C7B7A1C033C26C966ED5E32BE7E772B94E81345DC25E5B1692E12FA8F4 |
Key | Value |
---|---|
FileName | ./usr/share/doc/iqtree/run-unit-test |
FileSize | 2045 |
MD5 | BC20D54C0B2020C189F1B9FD66B79A0D |
SHA-1 | 245672DB9AF15138E0FE99E76EB658E680A6D434 |
SHA-256 | A36E93FACBDDE341A02D14159A2C3DE48CE563C3CCC2C2A72A0D151D42C5472C |
SSDEEP | 48:WCdg/4OU65sBbk3/BisAh/A0ZU/0a2TzVnn:Rgg/Wyb4Zi5h/A0k2Vnn |
TLSH | T10041A149C344F0387022F65CA56A31D206E91209CF949E3A54C03A2678F8E9F77FB7E2 |