Result for 206B11618612E18829BF778DD556BA167D9EBDE9

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Children (119)

Query result

Key Value
FileSize425704
MD5F4D203AC323C8BBE693C79058CCAE13E
PackageDescriptionintegrated RNA-Seq read analysis CRAC is a tool to analyze High Throughput Sequencing (HTS) data in comparison to a reference genome. It is intended for transcriptomic and genomic sequencing reads. More precisely, with transcriptomic reads as input, it predicts point mutations, indels, splice junction, and chimeric RNAs (ie, non colinear splice junctions). CRAC can also output positions and nature of sequence error that it detects in the reads. CRAC uses a genome index. This index must be computed before running the read analysis. For this sake, use the command "crac-index" on your genome files. You can then process the reads using the command crac. See the man page of CRAC (help file) by typing "man crac". CRAC requires large amount of main memory on your computer. For processing against the Human genome, say 50 million reads of 100 nucleotide each, CRAC requires about 40 gigabytes of main memory. Check whether the system of your computing server is equipped with sufficient amount of memory before launching an analysis.
PackageMaintainerDebian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageNamecrac
PackageSectionscience
PackageVersion2.5.2+dfsg-4
SHA-1206B11618612E18829BF778DD556BA167D9EBDE9
SHA-256FE9B3B495D948E85F53D05B0B4CB9675FAB4C8DCD0EE49BF4DD3C72C32CF50C2
hashlookup:children-total119
hashlookup:trust50

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Children (Total: 119)

The searched file hash includes 119 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-17749-genome.fa
FileSize1232
MD514C065ABD67D129666BBB81D80E8C9E2
SHA-10054DE3CB50B065A9DDC3C6B0EC8EFD7250E88B4
SHA-256E2DAEBAC134F280F9D111831F0F607A4E9E4B11999C5AF223DE532F311A67797
SSDEEP3:PxJ3rkQrfioiixvriTkHkikRkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk7:JJkivriTRRSXUmT4ckduzLJRcai5Ul
TLSHT173219EFAD7F059CDD352018B081C13E18CE4616F4A03A71129E4132D0D64861E48B445
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18793.should_get
FileSize383
MD589730026C64E5C73CCFCF7CCA9A7CFC4
SHA-102067B1AB1D583551E2B833CD65869D20BAB953E
SHA-256D9D5747898B30F68F060ACB543ADDBA8D40193AE4C38FFBF2729E26A4832CC76
SSDEEP6:Vw+tn2MnC+nn9BKw+tnIkgrikno2EGw+tnIvQ1o2w+HGVar3f/n:uGnPYgrHucWHZaLn
TLSHT190E092A5C859303181E8150EBE27C97AE5FDB52473C513605C10EAE9C14FD5D70A5CA0
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-16581.should_get
FileSize496
MD5CAB4B11B640543B55CD6EBB154765D03
SHA-1038498A319DCF5E4E01D7BC764EFEBACF2309946
SHA-256C171B25457528E95939377C84C607A115AA6CC70084DD698FBFA1E1FBC2B3CA3
SSDEEP12:uRnx4ghWGvhWGWHAAz6VYtCDoMGnXXhIfU8n3V:ubFXvXYLz6VYADSn+fXl
TLSHT169F059F1095B36300BF0210F7B27DAFBDAFC663433C416609C009B9D884EA14E0A66A0
Key Value
FileName./usr/share/doc/crac/examples/test_f/cigar/consistency3.should_get
FileSize2808
MD560A0224B850B51CA86A9B6726DE6B239
SHA-106AB601A9E9DEC5B4183BCCBF91E05C1E878F5C2
SHA-2561B3D8C5DE2EA3CFC9EEA7078E9269B538565594A69E53A034847BF590191DA0E
SSDEEP48:0lN+zryxYx3xlN7BO7JRw0a0aSuJSL0nQ7uS:6N+a2txj7BO7QSIwuS
TLSHT1FD514C37A21A255EFAD2DD54F419E305EFF26468262BD78809C5EAC3480C84CA4DB0F9
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-17175-2-genome.fa
FileSize21932
MD5D543ECD2ECBCD20201F8DA14A4690C5C
SHA-10A01C06BF55E834EB3C07640C5954057513C13D4
SHA-256952405A366A2AE438BE76F3C935DC75807A34709A2C503AFE4C1999499873B9A
SSDEEP192:6o9GMj36htfTcPxxdr7IMfQJHJL4jsfH3okjYzNODUx3/W:JkMOhhgPVfCh4mXczOUx3/W
TLSHT10AA2E3F56BF07DB6524504430B9DD3C1CCE4BD764E2BAE321EDE2A198C34A32D69B05A
Key Value
FileName./usr/share/doc/crac/examples/test_f/causes/biotag.fa.should_get
FileSize469
MD5A3163D49E4BA8CD3E31DCA50223B1941
SHA-10FC641D5D7BC9B74AAFC998DE95AA266600B7B2E
SHA-2560B609312436D0DCA094D643646CD4DB54978726B50BDA918FF2805A4521D9A4B
SSDEEP6:VwUKh8BKwDd4StAITzrwYEGwDd11o2w6iZQVPN5R8imu5HWxGpHtLp5yWxGMfD5u:uUqsDyStxzrwxDPWH6iZQr8imUc+c
TLSHT1D4F0E229D06B382082CA8E4EF825E97AF5FC282020D413291C14BFE4970282D01B2D78
Key Value
FileName./usr/share/doc/crac/examples/test_f/cigar/genome.fasta
FileSize2349
MD5BA340C05DAA7D734125C8E58A9EDDF58
SHA-119E9C32E251FF5C28DFB2870FD268F98B98D3F59
SHA-256C1F95D066D8E57FEA5B91F6C41D40F928D284F85B974D2FFCD1D7EA6FE37720A
SSDEEP48:LZiQsJBOizPmkNivWyveHUAbcwbGCSZVkQiO:LcQsXOCOkNyveHUAbcwbG7ExO
TLSHT1D741EEB2B7FC1975E3C2048F04AE73C28CE03E9F8E1B6F111AA5011B49A8B21FDD9156
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-15672.should_get
FileSize405
MD5640C0BF7A2B1C88FABD042C302C86A8A
SHA-12120FEEC614252363F90F4DF6D2E50D456D1C218
SHA-256A54DC1C59012012878B7F39F2259C952E4DAFB6F3CD081398587753682396635
SSDEEP6:Vw+crnC7qXw9BKw+cl10EGw+c11o2w+RNC8gIJd3TLEoXZTRQZxYvv:uZnvsXv/WHAscJ5pZVQPCv
TLSHT1EFE092914E12347101D52A2EBE2BC9B9E6BDB660308E32B5CC019BA9C69BC0530B5DE4
Key Value
FileName./usr/share/doc/crac/examples/test_f/toy.fastq
FileSize2754
MD5971497A81CC35DD9E1043BCA4D73E27C
SHA-122AAB937F582E5156EA3EE61F4B5C896D334A33A
SHA-2563247DBAEBEF79E0686AE2F983148E84E5DBD308DADF9C814FB5E5C905F6475ED
SSDEEP48:tbzYSTy9JjEW04r5ft9UsQrIaesaBuo20000000ReRFP+NIYHl6mFH:Bkky9hEW5r5ft9UsQrIaeNpveRVoIYHF
TLSHT1265164B0B6E079353257054706A8B3C14CE0DD2D0F13A5A23EAAE63E4E645B7FA1D15B
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18435-read.fa
FileSize207
MD58D64E9F53A4FCCA4FC00AEEAEDD3F7F3
SHA-123DF5438A428864D1608932B1EDE6341DE299381
SHA-2564E18BA2E4BF751BE6F228DFFD5FF58CB0C3C9277FD19CF849E392DF6E0BB3A7C
SSDEEP3:sigggRppiiFVikmxiRdKSGQikGT04xvkAx+mERTmFAkkXFjmiiFk6OVX+c:siaiiFj1RmhBx8U+yOjmBIx+c
TLSHT1EDD0E9B6ADE4B556F2C7000B0CED63C0C4543C6C4E6BB6212F55111F4D14D6DFC52455





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