Result for 1B112F5EC2F41BD08B1B259A505DD6674B8360C6

Query result

Key Value
FileSize171852
MD55146894761A3DF267C11528840D3B579
PackageDescriptionmanage nucleotide sequencing read data To facilitate the multiple phases of the dazzler assembler, all the read data is organized into what is effectively a database of the reads and their meta-information. The design goals for this data base are as follows: * The database stores the source Pacbio read information in such a way that it can re-create the original input data, thus permitting a user to remove the (effectively redundant) source files. This avoids duplicating the same data, once in the source file and once in the database. * The data base can be built up incrementally, that is new sequence data can be added to the data base over time. * The data base flexibly allows one to store any meta-data desired for reads. This is accomplished with the concept of *tracks* that implementors can add as they need them. * The data is held in a compressed form equivalent to the .dexta and .dexqv files of the data extraction module. Both the .fasta and .quiva information for each read is held in the data base and can be recreated from it. The .quiva information can be added separately and later on if desired. * To facilitate job parallel, cluster operation of the phases of the assembler, the database has a concept of a *current partitioning* in which all the reads that are over a given length and optionally unique to a well, are divided up into *blocks* containing roughly a given number of bases, except possibly the last block which may have a short count. Often programs can be run on blocks or pairs of blocks and each such job is reasonably well balanced as the blocks are all the same size. One must be careful about changing the partition during an assembly as doing so can void the structural validity of any interim block-based results.
PackageMaintainerUbuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageNamedazzdb
PackageSectionscience
PackageVersion1.0+git20180908.0bd5e07-1
SHA-11B112F5EC2F41BD08B1B259A505DD6674B8360C6
SHA-256582E011ED60106C66E9A9931CD15A93F1F24653AE8556EF6E708FB37BE63B2A1
hashlookup:children-total25
hashlookup:trust50

Network graph view

Children (Total: 25)

The searched file hash includes 25 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/bin/DBdump
FileSize133136
MD5092D995F3996EA06F420C7DA978C4DF2
SHA-11050BF3ECF209C40362774982BD61D06A51880CC
SHA-256CF6B6CA6DF9D4F7C3C555C9781010F08AF174D0474E0A4C372B810395A62E6C8
SSDEEP1536:AIIq7au3bvKKmJ0rhbqwhHsbifV/FIXg2iNQO6XW8ukSExFhS:AIIq7auWBFIMG8XNiNQO2nS
TLSHT167D31727214C5B0EEB92387B478E6E5673A23C17037156E7B841036B6FAC739E60AD4D
Key Value
FileName./usr/share/doc/dazzdb/changelog.Debian.gz
FileSize930
MD5664D8EAC3181B76476FF0BD7B36A7BBE
SHA-11BBE255D4E263EA9C7FB5C8D9B02EEFAB86B4322
SHA-256D80E0041089B981000D3AFBC677BBAB35706EE59FEF935FBF8C2D58C4FCA5194
SSDEEP24:Xlcbmi2sBZaEpAO1qlKgvaTEIVxjSvdFdEK9N7j4gVzdJpdb:XlLi2PEptcl1vaYIVxydFdLrdzb
TLSHT1F211B764A6A00AFE493514A0ACBC81154EBF16F597D6C61D4FCDF3F40264CAD42A5143
Key Value
FileName./usr/bin/fasta2DB
FileSize133136
MD5A0A0C14EF33E5D6DCD131F00C6B2363C
SHA-129B0D16EF585F796527442A2087F3AE960E7B94A
SHA-256081E280627722B81193DFD527F77619366F4E1CD307A01568A85A9387F4C1062
SSDEEP1536:aS98l/qqwSZX9yH69sKyXlen1ybPqfiVGzR7RPRgT:aS98lPDtmbXsn1ybPjkRg
TLSHT190D31817204C4B0EEF92287B478EAD5277A63C1703724697B841036BAFBD739D64AD8D
Key Value
FileName./usr/bin/arrow2DB
FileSize133136
MD5D5B4CD06D064E81B020FCB836E008B8A
SHA-1522A014FAB9D1D990C44023DD22ECEA8F73A3254
SHA-2569BDD9F289DF0C5301B76D305768A3B54B47C13535B73BD6C7076EB8B82DDF608
SSDEEP1536:nSo8lTQKD5YS9qwWdcss4WffG3akXKWTIiKdsPKi4OTqWfE:nSo8lkq56Hdm9UXXTIixOWc
TLSHT1A7D31817208C4B0EDB82397B478E6D5637A23C2703724697B841036B6FBCB3DD65A98D
Key Value
FileName./usr/bin/DBstats
FileSize133232
MD5C5CF5AE5CAF2AD4438B5437C6C692FB5
SHA-15833F7724DCAC771E83FC4EBA642E9A32F807F9D
SHA-2560E282BF57CDDE2B1580768A9352851AE3451C63AB546471BE17F89BAF3C4D79F
SSDEEP1536:hrQ0Di9qwmpy/uwvOGXSoFvuyEdjG5nyhWSExCn:dQ0DhXw2oX15uyuCKn
TLSHT16BD32817258C5B0ADB92357B438E6E4637A13C1703B247E7B801035BAFBDB39D64A98D
Key Value
FileName./usr/bin/Catrack
FileSize133136
MD5A91C7F3212DE52B2F5897215C7580389
SHA-163357DBF0D4DE16DA6D49B2AD93D70A5BC248E42
SHA-256845AABA4CE46D969F3A5D366A2134FC46D31F87AE4657D9970F7CF4BE59C4C48
SSDEEP1536:gUAOWhYShNbqwbKK7R57yDTGX1Bm+ACEChOE0MwSqz6siX:bAOWhpo6N777tXrLAC/85i
TLSHT1B5D31727248C5B0ADBD2257B478E6D4677A53C1B03B287D6B801035BAFBC739D60AD8D
Key Value
FileName./usr/bin/rangen
FileSize67688
MD53273ECCA4AAC3C877E286C04D7271E18
SHA-1664257F4135BE1E8489033C75671F05469CC1E89
SHA-256B257A07669E248C55C57925904C67F25097F0DB7572EFB79E1A17EAB5E0762B5
SSDEEP384:rhEWHQSTMuvo5izq5hNtTA3/zSlNU8/ZpjI:rhEWHQSTMuvo5izq5hNtTC/0pjI
TLSHT1596362573326D66BCA24A839935F2B3173712D8E036153136504A3372FDBB2ACE27A52
Key Value
FileName./usr/bin/DB2fasta
FileSize133136
MD52B4807886045E8BFF19D31C687ECCB8A
SHA-16F469A367C3D3BA54131A45428DB995B6C9E0AFF
SHA-256B5AC54DA2748544D09F3B62B0C9471DAEE9A061F1D0A99A612512107A8F04D1F
SSDEEP1536:dQFGRV+CqwM7uenL3ItXEdWdLOTmvlqvfVgAG3U:dQFGRklKKwXwWdLOqmM3U
TLSHT1D1D31917248C5B0EDB92257B478EAD4637A13C1703B247D7B901035BAFBDB39E60A98D
Key Value
FileName./usr/share/man/man1/dazzdb.1.gz
FileSize314
MD5824A613A648871A594250FAC0669F7C1
RDS:package_id182052
SHA-16F6B2AB7DDDA8A2A8975260B895769AF5E9BD932
SHA-2564F41618B77F55DCF937B1EDBF25A45C6F3D9CE6C9C7AEC483222A2DE91CD20F7
SSDEEP6:XtFP4R/X/9wpXIVezEv2hKJmqZywm7wCMcseeoZwFA4K/lW8abMjebnQiZMkln:Xv4VFwGVea+SmAquFdMlnabZDhln
TLSHT1FAE07846C1550572D92FAB36961D5FC30B85D01C9A1E8B9711DBF05C1DC549A8844F12
insert-timestamp1679426053.3545508
sourceRDS.db
Key Value
FileName./usr/bin/DB2quiva
FileSize133136
MD5B3FC8CAC03029A32B6C0D38DC7D90738
SHA-17035C62C9D0C55AE01562FB712218D47D54FE4BA
SHA-25677368CCF316B3D83B8ED3A91E14DDE25F4CA8D7D9EBBDEBA8CA739F207DA5841
SSDEEP1536:DQQGRYMGqwTaDRjUAiazmJ/dTXEECf/6qo0o6u7kA5WL:DQQGRYsIaRUBaiTX6f/6RFsL
TLSHT145D31827258C5B0EEB92257B478E6D4637A13C17036247D7B801035BAFBCB39E60A98D