Result for 1701CDFFEFD0B1162E2416BE2F585830055C7A84

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Children (243)

Query result

Key Value
FileSize934104
MD5D4618410FCE31093C8821D820DC83880
PackageDescriptionintegrated RNA-Seq read analysis CRAC is a tool to analyze High Throughput Sequencing (HTS) data in comparison to a reference genome. It is intended for transcriptomic and genomic sequencing reads. More precisely, with transcriptomic reads as input, it predicts point mutations, indels, splice junction, and chimeric RNAs (ie, non colinear splice junctions). CRAC can also output positions and nature of sequence error that it detects in the reads. CRAC uses a genome index. This index must be computed before running the read analysis. For this sake, use the command "crac-index" on your genome files. You can then process the reads using the command crac. See the man page of CRAC (help file) by typing "man crac". CRAC requires large amount of main memory on your computer. For processing against the Human genome, say 50 million reads of 100 nucleotide each, CRAC requires about 40 gigabytes of main memory. Check whether the system of your computing server is equipped with sufficient amount of memory before launching an analysis.
PackageMaintainerUbuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageNamecrac
PackageSectionscience
PackageVersion2.5.2+dfsg-2
SHA-11701CDFFEFD0B1162E2416BE2F585830055C7A84
SHA-256DEB960E986F8ED66484D3C8D452A4CC8B75BCAA60AAFFE826DC850C68612C1E8
hashlookup:children-total243
hashlookup:trust50

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Children (Total: 243)

The searched file hash includes 243 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-17749-genome.fa
FileSize1232
MD514C065ABD67D129666BBB81D80E8C9E2
SHA-10054DE3CB50B065A9DDC3C6B0EC8EFD7250E88B4
SHA-256E2DAEBAC134F280F9D111831F0F607A4E9E4B11999C5AF223DE532F311A67797
SSDEEP3:PxJ3rkQrfioiixvriTkHkikRkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk7:JJkivriTRRSXUmT4ckduzLJRcai5Ul
TLSHT173219EFAD7F059CDD352018B081C13E18CE4616F4A03A71129E4132D0D64861E48B445
Key Value
FileName./usr/share/doc/crac/examples/test_f/causes/genome.ssa
FileSize7371
MD5B4329AA686DCB3AAB33593F2B4264AD8
SHA-10093F72E88241911EB1B24D3655F3DF9CD6FA693
SHA-256E4A4428CD6546458F7B2B633C5790D3B7E15D4D10E758D5B2C226666CE3F998C
SSDEEP48:2n/J4hQyoBdln2Enjzj7qOXkrR8mTSffblL30wnYNVAeqaAC7jMjh:2Bb5Bd92ujzvqXrR8fRL3PuV0c7jMjh
TLSHT1A8E1B50F9BD54EC7D02E0DB5448B9B5C25ABDD354B120603DA387D2B6EB62B43B81E78
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18793.should_get
FileSize383
MD589730026C64E5C73CCFCF7CCA9A7CFC4
SHA-102067B1AB1D583551E2B833CD65869D20BAB953E
SHA-256D9D5747898B30F68F060ACB543ADDBA8D40193AE4C38FFBF2729E26A4832CC76
SSDEEP6:Vw+tn2MnC+nn9BKw+tnIkgrikno2EGw+tnIvQ1o2w+HGVar3f/n:uGnPYgrHucWHZaLn
TLSHT190E092A5C859303181E8150EBE27C97AE5FDB52473C513605C10EAE9C14FD5D70A5CA0
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-16581.should_get
FileSize496
MD5CAB4B11B640543B55CD6EBB154765D03
SHA-1038498A319DCF5E4E01D7BC764EFEBACF2309946
SHA-256C171B25457528E95939377C84C607A115AA6CC70084DD698FBFA1E1FBC2B3CA3
SSDEEP12:uRnx4ghWGvhWGWHAAz6VYtCDoMGnXXhIfU8n3V:ubFXvXYLz6VYADSn+fXl
TLSHT169F059F1095B36300BF0210F7B27DAFBDAFC663433C416609C009B9D884EA14E0A66A0
Key Value
FileName./usr/share/doc/crac/examples/test_f/index_genomes.sh.log
FileSize39
MD5EBDAC7A9CDFA377E882E0AC605D32978
SHA-104D151A357CE3865AFEFC578935B04AF07EEA18C
SHA-256527DEC56412A9CC311696DCA3F5808F16670614CDA78A6AB895EEC5DAEC0DF1A
SSDEEP3:52213S4MqdWf2:KqdY2
TLSH
Key Value
FileName./usr/share/doc/crac/examples/test_f/cigar/consistency3.should_get
FileSize2808
MD560A0224B850B51CA86A9B6726DE6B239
SHA-106AB601A9E9DEC5B4183BCCBF91E05C1E878F5C2
SHA-2561B3D8C5DE2EA3CFC9EEA7078E9269B538565594A69E53A034847BF590191DA0E
SSDEEP48:0lN+zryxYx3xlN7BO7JRw0a0aSuJSL0nQ7uS:6N+a2txj7BO7QSIwuS
TLSHT1FD514C37A21A255EFAD2DD54F419E305EFF26468262BD78809C5EAC3480C84CA4DB0F9
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-case-sensitive.tap
FileSize502
MD5FDC68B5C1983F2C2F34FB9460188E2B6
SHA-106C513AFF8BD3F495468C2D44CEA4A610B2AF202
SHA-256AE78901D7D7237B13A961A7539F519C3C66C23F320EB2D83F7D4D7352D66D8E5
SSDEEP6:SbOM7qwwJF/rFtEWD9xM7qwwJF/rFsyVM7qwwJF/rFvPdaLxM7qw4oWJF/rFtEW+:WO5L/IS5L/X5L/RixPL/IHPL/kPL/Rk
TLSHT193F05EBF2BDC173307A52210B909308F3715EEB49F0069B9927CF0092205DE496A35D3
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-18524.sam
FileSize3945
MD5E65B9FC2DB647A4982278568A3D1DD8D
SHA-10713607520E8A9F176056783EF5AC14468289B57
SHA-2564FC343E16ECB650007847B9D7B6A35B25FDBEE44BEE3D0504BFF54388F2BA192
SSDEEP96:wDb2F+xNE2F+xN72F+8RwOfib2F+xNE2F+xN72F+8RwOfu:wZwoGwou
TLSHT1DB8127B81E914946242417E7685F368E56C88605F1983983FF39CF2C9D746A3E47F8E8
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-15605.tap
FileSize54
MD541AD9AF1DEEE62CD5580A292BF220CF5
SHA-1076C651767C4B248E69D048B9EE962AF820C1ED1
SHA-256BE269293D5895D3A6F9713C13F4A90F55CE49A1974B3D93DC42F85BA9F6D7C84
SSDEEP3:SL2E4SGUTjL3OOMsFvn:SqTSGeL3OOTVn
TLSHT180900294AD759134031552621C1609555289455449C965606C4B7840360D08D3D18AF4
Key Value
FileName./usr/share/doc/crac/examples/test_f/bug/bug-15646.sam
FileSize5037
MD5EE8B56D14A478281904177333C15D701
SHA-10906E7F114B2A313B4BC4829DAAD202A91650BA9
SHA-25649BFF072E14F27468E141132C1D24FDB49953DA4DDF2520F3372B91355B77EE0
SSDEEP96:stYtzE5E6er78ogqMc2FoeaifMc2FoeaiCMc2Foeain7:sqRE5wrgqMlfMlCMln7
TLSHT17CA18B7899212DF6559C239E291F369C066CB45CFF7469E0DB25BD0A0D00AD740BF8BB





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