Result for 0E4462C11DF634B5682307B9D081A9B0A981E50B

Query result

Key	Value
MD5	ECE88130BC0A2DDADD99249A04C32468
PackageArch	ppc64
PackageDescription	Rsolid is an R package for normalizing fluorescent intensity data from ABI/SOLiD second generation sequencing platform. It has been observed that the color-calls provided by factory software contain technical artifacts, where the proportions of colors called are extremely variable across sequencing cycles. Under the random DNA fragmentation assumption, these proportions should be equal across sequencing cycles and proportional to the dinucleotide frequencies of the sample. Rsolid implements a version of the quantile normalization algorithm that transforms the intensity values before calling colors. Results show that after normalization, the total number of mappable reads increases by around 5%, and number of perfectly mapped reads increases by 10%. Moreover a 2-5% reduction in overall error rates is observed, with a 2-6% reduction in the rate of valid adjacent color mis-matches. The latter is important, since it leads to a decrease in false-positive SNP calls. The normalization algorithm is computationally efficient. In a test we are able to process 300 million reads in 2 hours using 10 computer cluster nodes. The engine functions of the package are written in C for better performance.
PackageMaintainer	Fedora Project
PackageName	R-Rsolid
PackageRelease	4.fc16
PackageVersion	0.9.31
SHA-1	0E4462C11DF634B5682307B9D081A9B0A981E50B
SHA-256	271BCFA223446AAC286457BA9EAA071AF398F50D542D246F793AC7AF0E3C6DE9
hashlookup:children-total	20
hashlookup:trust	50

Network graph view

Children (Total: 20)

The searched file hash includes 20 children files known and seen by metalookup. A sample is included below:

Key	Value
FileName	./usr/lib64/R/library/Rsolid/INDEX
FileSize	175
MD5	D454BC562761C02412D381C9A347C69C
SHA-1	177007733670BF451339D4FB30F6C2632B2E4258
SHA-256	BC1CD3489BA8A37B576D916B24400DF8A7F231E00DB0D0981B1AA4CA93CF557D
SSDEEP	3:Yp//aLRMJgVEJw18KElKXvGQ1xWxQT3/bCFY:sMMBJ+8KrXvaQTCY
TLSH	T176C092B3E2984E22A93BA15758C88BA041B572333B4A6A8F7C1EA4401B4206036367B8

Key	Value
FileName	./usr/lib64/R/library/Rsolid/data/prop.Hs.rda
FileSize	97
MD5	2ACB03264FA6AB75C0F89FD9FCA99975
SHA-1	18F0EB0CC822D137117CBB2B77E065E1417DF61A
SHA-256	D531C4D7D7107A4953A560CE5897AF646E1A1D8EC05D462E8C6474F850140BC8
SSDEEP	3:FttsdFtD3L5WS1KKmrOrDOIJ/n:XtgLUGPVJ/n
TLSH	T1C6B01298808A3410D0CACC312010099A11D7B401461C2CCAA2200199C0982C7CB5D92C

Key	Value
CRC32	375C6D7B
FileName	./usr/lib/R/site-library/Zelig/html/R.css
FileSize	1179
MD5	444535B9CB76DDFF1BAB1E1865A3FB14
OpSystemCode	362
ProductCode	13543
RDS:package_id	182052
SHA-1	1C99E2730C58AC3191F063F2F79C505D2E890397
SHA-256	E0A68E98CA3B506E8181A17634C18CAF903F4CDF983105B36E2D7DFF7E2E30D8
SSDEEP	24:5zUURQcpMs91Ep9swJ1Epk61Ep0p4G1EU1Ep0V42Xm4wi54u:5gdkqtCpiXCVQ9u
SpecialCode
TLSH	T1E821D6529B6D000AB77F49413A279739429494BDDD6A5F3C30ADB8A4FF81470739AB42
db	nsrl_modern_rds
insert-timestamp	1679424460.1894357
source	RDS.db
tar:gname	wheel
tar:uname	root

Key	Value
FileName	./usr/lib64/R/library/Rsolid/html/Rsolid.html
FileSize	3141
MD5	258C1051E1B03EEF7580B940A0E30A95
SHA-1	2C6DECA282B2029007BF11978A3A8D31CD2CDEE7
SHA-256	D2C26A592CD84403BEC5C86E1585602872ECB6ADA49CD148B2CD25ADC8007826
SSDEEP	48:Bipbse4Ry7FFwVGNKBxQ2VfU8W1hOvfDjyNDxtJ+S7nJYF+z6mts:BveKGOVGk3xVfUH1hOvCDxtB7qIFy
TLSH	T13D518759E7C8071BC811B2987DE8E3E64FD9913617FE41C02C5DD814E64457062F6BF9

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/paths.rds
FileSize	76
MD5	F64223755ABBE0CB222B5682C53C210F
SHA-1	398F8F6D04505923A6823F5B685AC0D295C8827C
SHA-256	5A3108E29B0C3B77DB745BC3D5DB55E8284B00E4EBC824898B44B0B94B66129F
SSDEEP	3:FttVFHpCwDDF1Ocdmuu50O:XtVFFDvzwu20O
TLSH	T103A0220023C8803BECA0B038C3EC00283C02E00A8B23883E32C003A803CA323A0C0038

Key	Value
CRC32	C0916E37
FileName	packloader.R
FileSize	672
MD5	6E60A4480E0345D65902FC23B54BFFD6
OpSystemCode	362
ProductCode	8388
RDS:package_id	8388
SHA-1	42E0C7459F3A0A7109CFC319A7EB2139A9B34B43
SHA-256	9EB2ED41481D643B70AD5E7B37EBF2968EC7D69D13D0F8941E6E7B160275DC86
SSDEEP	12:0INhlEn1oG+/yjYA3AMcOrw1PhMbmAbN2hh8KNMcbapSFshrE/oockwsr:0INhaIyjYU9rw1PhMbmG+h8OMcbapSFp
SpecialCode
TLSH	T1D001ACE981801DD3BB0348187CAF11099F5C712B65C8109078ED8AAA0FDCE398A63B3A
db	nsrl_legacy
insert-timestamp	1648739135.0132136
source	RDS_2022.03.1_legacy.db
tar:gname	wheel
tar:uname	root

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/AnIndex
FileSize	14
MD5	27F86373197F07D636A5545AFF2255A0
SHA-1	47E504EE5B5100037DBCF1809EA13D94F84AB65E
SHA-256	53F18991FDEA62AB48EBCF22AEFE84CC4E79DED71940693E17D1D9D156BFD282
SSDEEP	3:Y8cv:le
TLSH

Key	Value
FileName	./usr/lib64/R/library/Rsolid/html/00Index.html
FileSize	1190
MD5	CCA25D2A2CD6AF138A18C561984F54D5
SHA-1	4B27E46C484BDF96A73B9654A980B43C6726AC82
SHA-256	7E77730937E0B9F82315E73E44A9E518B967479C8DECBF949649989276A1A704
SSDEEP	24:hMTIXF0SspbTXF0PPr5M26MFvujMR0F4h/1YZp5dLyNtiXF2g:BepbT49MMQ4eVLIti8g
TLSH	T1E4216736E0643A177823A95186C02ED857616626770A9E4E2F0E347B42093EF22337AE

Key	Value
FileName	./usr/lib64/R/library/Rsolid/help/Rsolid.rdb
FileSize	2719
MD5	DEF760DE13668CDB96FD6FBEE09DCCA5
SHA-1	6DA2A4968631AF7EF4710E63ABF781E837E3CFCC
SHA-256	07AE1BEF62947ACDD2DDB29D426132E93A5B33CA7551AC96427EBF39EF4E8F83
SSDEEP	48:b9p4a0dY7rfuA44dxt3D5ZgFbofN/cQOR0NJullpWb6VFZAjN:bT4fY7rfnxd73YdUE7bDgN
TLSH	T160515EC662ED22C0C4239C32360BF40D63E62771BB31AD4B15F1A29640F14006769F5F

Key	Value
FileName	./usr/lib64/R/library/Rsolid/Meta/package.rds
FileSize	687
MD5	C6071FC54D732EC351378B8CBD3A5D73
SHA-1	6E7CE8ED93CF85F4851A169D00075456EC7750BA
SHA-256	48B639512424A1E52451C2654FF1E256616D34211C36044D181999C5A12FFA63
SSDEEP	12:XV2kNisjGeK67xnkzKYSZCqWhraScGWoJob4CVG0/O6w2vp262pinGnAV+Htn:XVla6FnkOZCPmSEoG/r/5hS0no
TLSH	T1B701832C97648844F95EE29E632BA2C09348F73C508AEE60B5F341A39D98DD313CF538